XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTTGTTTATCTCTGAAGCCCAATTTTTAATGGGGTTATTTGAATTTCTGG
AGTCCAGCTTCTTGAGCTCTTTATATATATATTGGATATTAGTCCCCTAT
CTGATTTAGGATTGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTTT
GTCTTACTGCCAGTAGCAATCTACACATTCAATACAATTCCCATCAAAAT
TCCAGCTCAATTCTTCACTGAGATAAAAAAGGACAATTTGCAAATTTATC
TGGAATAATAAAAAAACCTAGGATAGCAAAAAGTATTCTCAACAATAAAA
GAACCAACTTTGCTTTTTATTGACTCACTAAATCCATCTAGCATTGCCCC
TATGTGCCCATGTGGGGCCTTCTAGTGGAGCATGGGAAACCTAGCTTCAA
TAAAGAGTCTCTTCACCTGCCAATAGTTCCTCACCAAGGGGTAGAGTAGG
GCCTGGAGAGATCATTTATGCCTACATGATTTTACAAAGGTATTGTGTGG
GTAGCCACAGCTGCTGTGAGTTCATGAATTCTACAGCCATGTCAATCCAC
AGCAGAGGCTAACCACCTCTCTATTGCTGCAACCCTTTAATACAGTTCCT
CATACAAGTATTTCTGTTGCTACTTCATAACTGTAAATCTGCTGTTATGA
GGCACAAAAAAAATCTGTGGTTTCCAAGGG

NNNCCGATGAAATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCTATTTGAAGATAAAGTCTT
TCTTTGTGAAGATTTTTCTTTTCACTCTTTTGTTTAAATATTGACTCTTT
TCTCAACTCATTTTTTAAATTTTTATGAAATTCCTGTTCCAAATTCCAGG
CCTATCTTCCTATCTTCTGATAACTTTCTTTTACTGTGCCAGCCTTTGAA
ATTTTATTCTTTTCAGAGATTTCTTTTACTTGAGCTTTCCAAATCTCTTC
TTTTGTCAACATTTGGTTATGCAAATGTTTGGTTTTTCTAATATATTTGC
TGTATTTTTAAGCTTAAAGTCATCATGTTGAGTTAAAGTGGTTTACCCTT
AGTTACAACATTTATTTATTTGTTTATTTATTTATATGTTTTCTTGAGAC
AGAATTTCTCTCTGTAGCCTCACTCTGTAGATCAGGCTGACCTGGAACAT
GGACAGTCACCTGCCTATGCCTCTGAAGTGCTGGAACTAATGGTGGGCCC
CCGCTGCCCAACTTTTTTTTTTTTAAAGAATAATTTACTATTATATGAAA
GAAAATGGAGCCGGCTTCTAAACCCTAAAAAAGGCCTAAATTTCTTATCA
AAAGGGTGGAAACAACACTTGCTGGCCGGTTTTTAAACCACACCTCTCAA
AAAAACGCCGGTTTTTATTCTCTTACCTTTTTTTTTCTCCTTCCCCCCCC
CCTCTTTT

Query= MSMg01no448_a23.g1 MSMg01no448_a23.g1 CHROMAT_FILE:
MSMg01no448_a23.g1 PHD_FILE: MSMg01no448_a23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:11 2005
         (406 letters)



>mm_chr8_63685172_63685979
          Length = 808

 Score =  746 bits (386), Expect = 0.0
 Identities = 402/408 (98%), Gaps = 2/408 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttctatttgaagataaagtctttctttgtgaagatttttcttttcactcttttgtttaa 60
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 534 tttctatttgaagataaagtctttctttgtgaagatttttctcttcactcttttgtttaa 475

                                                                       
Query: 61  atattg--actcttttctcaactcattttttaaatttttatgaaattcctgttccaaatt 118
           ||||||   |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 474 atattgtctctcttttctcaactcatttttttaatttttatgaaattcctgttccaaatt 415

                                                                       
Query: 119 ccaggcctatcttcctatcttctgataactttcttttactgtgccagcctttgaaatttt 178
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ccaggcctatctccctatcttctgataactttcttttactgtgccagcctttgaaatttt 355

                                                                       
Query: 179 attcttttcagagatttcttttacttgagctttccaaatctcttcttttgtcaacatttg 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 attcttttcagagatttcttttacttgagctttccaaatctcttcttttgtcaacatttg 295

                                                                       
Query: 239 gttatgcaaatgtttggtttttctaatatatttgctgtatttttaagcttaaagtcatca 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gttatgcaaatgtttggtttttctaatatatttgctgtatttttaagcttaaagtcatca 235

                                                                       
Query: 299 tgttgagttaaagtggtttacccttagttacaacatttatttatttgtttatttatttat 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tgttgagttaaagtggtttacccttagttacaacatttatttatttgtttatttatttat 175

                                                           
Query: 359 atgttttcttgagacagaatttctctctgtagcctcactctgtagatc 406
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 atgttttcttgagacagaatttctctctgtagcctcactctgtagatc 127


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 808
Length adjustment: 9
Effective length of query: 397
Effective length of database: 799
Effective search space:   317203
Effective search space used:   317203
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)