Query= MSMg01no448_n12.b1 MSMg01no448_n12.b1 CHROMAT_FILE:
MSMg01no448_n12.b1 PHD_FILE: MSMg01no448_n12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:15 2005
(485 letters)
>mm_chr8_27521220_27522104
Length = 885
Score = 886 bits (458), Expect = 0.0
Identities = 473/478 (98%)
Strand = Plus / Plus
Query: 3 ggaattctccagtttatttcttccagagttcatctgcaccctcagcattcctgagcctcc 62
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattctccagtttaattcttccagagttcatctgcaccctcagcattcctgagcctcc 262
Query: 63 aggaactgcagtatcagctctcctgggtcaccagcctgctaaaccacattgcaggctttg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aggaactgcagtatcagctctcctgggtcaccagcctgctaaaccacattgcaggctttg 322
Query: 123 aatttgttagttttcttaatcttgtgagacagtgacatacagtaaatctatttaaatatg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aatttgttagttttcttaatcttgtgagacagtgacatacagtaaatctatttaaatatg 382
Query: 183 aatgtacacatagatacacacacagacacacacagacacacagacacacacagacacaga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aatgtacacatagatacacacacagacacacacagacacacagacacacacagacacaga 442
Query: 243 cacacacacacacacacactgttagttctgtttctataaagatcttcaaccaatatcaat 302
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cacacacatacacacacactgttagttctgtttctataaagatcttcaaccaatatcaat 502
Query: 303 tttgctattagagcagaggaagagaatcttgggaatagatttttggtgttggttttggtg 362
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 503 tttgctattagagcagaggaagagaatcttgggaatagattttcggtgttggttttggtg 562
Query: 363 tttctggagctggttaatttaaagatgctggtaactatgaaggaaaggaagcactgcggt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tttctggagctggttaatttaaagatgctggtaactatgaaggaaaggaagcactgcggt 622
Query: 423 gatcacacagtacatctgtgcaaaacaccacaggcagacattcctaatcaagtctgtg 480
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 623 gatcacacagtacatctgtacaaaacaccacaggtagacattcctaatcaagtctgtg 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_n12.g1 MSMg01no448_n12.g1 CHROMAT_FILE:
MSMg01no448_n12.g1 PHD_FILE: MSMg01no448_n12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:15 2005
(410 letters)
>mm_chr8_27724297_27725106
Length = 810
Score = 733 bits (379), Expect = 0.0
Identities = 403/411 (98%), Gaps = 2/411 (0%)
Strand = Plus / Minus
Query: 1 tttatctagaatttcattgtaattcatttttgttggaggccattatttcaggattcttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tttatctagaatttcattgtaattcatttttgttggaggccattatttcaggattcttga 551
Query: 61 cttttgaaggacttttaccttgatttttttttttaatgtttcttatgtttttgcattagg 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 550 cttttgaaggacttttaccttga-ttttttttttaatgtttcttatgtttttgcatttgg 492
Query: 121 atctcgggtgagatggttagttgagtctttttaaaaatccacccttattcttgccaagtg 180
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atctcgggtgatatggttggttgagtctttttaaaaatccacccttattcttgccaagtg 432
Query: 181 cttgcagtcattgttcacaagggattaggttgcagattgatgta-ttttttttccctctg 239
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 431 cttgcagtcattgttcacaagggattaggttgcagattgatgtatttttttttccctctg 372
Query: 240 cttttttagtgctatgggcactacattcaatgaccaggacttccttaagggtagaacact 299
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctagattagtgctatgggcactacattcaatgaccaggacttccttaagggtagaacact 312
Query: 300 gcctgccaaaacagtcctatcaaggggttaggtcgtaccagtatgaaaacacagccattt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gcctgccaaaacagtcctatcaaggggttaggtcgtaccagtatgaaaacacagccattt 252
Query: 360 aatcctagagcactgataatcatgcttgcattaatatattagttactgtgt 410
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aatcctagagcactgataatcatgcttgcattaatatattagttactgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
