Query= MSMg01no448_p04.b1 MSMg01no448_p04.b1 CHROMAT_FILE:
MSMg01no448_p04.b1 PHD_FILE: MSMg01no448_p04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:24 2005
(324 letters)
>mm_chr8_14318459_14319182
Length = 724
Score = 514 bits (266), Expect = e-150
Identities = 311/330 (94%), Gaps = 7/330 (2%)
Strand = Plus / Plus
Query: 1 gaagttcatggtctatcttgaagcttgca-------tgggctaaggaccttcacccctag 53
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 194 gaagttcatggtctatcttgatgcttgcacccttcatgggctaaggaccttcacccctag 253
Query: 54 cccttggcccagataagctgctcaaatcttaacaatctagttactttgtaggatgtacca 113
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 254 cccttggcccagataagctgctcaaatcttaacaatctagttactttgtaggacctacca 313
Query: 114 aagtagtatcaactttaaagatgccttttaactgaaagaaaagaatgcatttcatcatca 173
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 314 aagtagtatcaactttaaagatgcctcttaactgaaagaaaaaaatgcatttcatcatca 373
Query: 174 gtgacatttactcatgcatatgcttgcatggtttggatagaaaatgactccttcgtgaag 233
|| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gtcacattgactcatgtatatgcttgcatggtttggatagaaaatgactccttcgtgaag 433
Query: 234 atttggtctcagctgatggcattctaaggaggcaggcctgcttgcaggaagtccagcatt 293
||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atttgatcccagctgatggctttctaaggaggcaggcctgcttgcaggaagtccagcatt 493
Query: 294 agagcatgcctcagcagagagtctcgtctc 323
||||||||||||||||| ||||||||||||
Sbjct: 494 agagcatgcctcagcagggagtctcgtctc 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_p04.g1 MSMg01no448_p04.g1 CHROMAT_FILE:
MSMg01no448_p04.g1 PHD_FILE: MSMg01no448_p04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:24 2005
(364 letters)
>mm_chr8_14506502_14507265
Length = 764
Score = 677 bits (350), Expect = 0.0
Identities = 359/362 (99%)
Strand = Plus / Minus
Query: 3 atttatgtgtatgggtaatttatttgcagatctgtgcaccgggaaattatctggtgtcct 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 atttatgtgtatgggtaatttatttgcagatctgtgcaccgggaaattatctggtgtcct 705
Query: 63 tggaggtcagaatggacgtctgatttcccaggcctggagttcgagatgttgtgagccacc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tggaggtcagaatggacgtctgatttcccaggcctggagttcgagatgttgtgagccacc 645
Query: 123 atgtgggtgcttgaggattgaacccatgtcctctggaagaacaggcagtgtcctcagatg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 atgtgggtgcttgaggattgaacccatgtcctctggaagaacaggcagtgtcctcagatg 585
Query: 183 ctaagccatctccaaagcccttcagttgtgcatttctgaaattcaggcaaactgggtctt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctaagccatctccaaagcccttcagttgtgcatttctgaaattcaggcaaactgggtctt 525
Query: 243 gacaaggactttcaatctagagatagatttaatttgaataatagtctattttcatctgat 302
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 524 gacaaggactttcaatctagagatagatttaatttgaataatagtcaattttcatctgat 465
Query: 303 ctgcgatcatgctttcaatgacttaatatgtccttctttactttccttcgacggtatttt 362
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 464 ctgtgatcatgctttcaatgacttaatatgtccttctttactttccttcgacagtatttt 405
Query: 363 gt 364
||
Sbjct: 404 gt 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
