Query= MSMg01no449_c19.b1 MSMg01no449_c19.b1 CHROMAT_FILE:
MSMg01no449_c19.b1 PHD_FILE: MSMg01no449_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:42 2005
(455 letters)
>mm_chr8_104798297_104799152
Length = 856
Score = 319 bits (165), Expect = 2e-91
Identities = 294/393 (74%), Gaps = 96/393 (24%)
Strand = Plus / Minus
Query: 1 attctaaagattt--tcccttatctct-aaaataattactgtgcaaaaatatccatgata 57
||||||||||| | | ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 391 attctaaagatatagt--cttatctctaaaaataattactgtgcaaaaatatccatgata 334
Query: 58 acttcagagcacagggtaaaatgagaaatagcaatgcaattagataccatcaaatcatat 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 acttcagagcacagggtaaaatgagaaatagcaatgcaattagataccatcaaatcatat 274
Query: 118 ccttatgttctttcctttttataatgaagttaaaatattctttatctctgagtgctgt-- 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ccttatgttctttcctttttataatgaagttaaaatattctttatctctgagtgctgtac 214
Query: 176 ---------------------------------at------------------at----- 179
|| ||
Sbjct: 213 tgtttcaaacaactctgaaagtgattccacttcattcaaagctgttactgtgaatgcggt 154
Query: 180 -atat--at---a---tat-------------aaaatc---------aattatatatata 208
|||| || | ||| |||||| |||||||||||||
Sbjct: 153 gatatcaatcagattctattaaggagaaagtaaaaatcatttatagaaattatatatata 94
Query: 209 tatatataattgatctcagcttcctaaaaattgaattctgtctctctgtctctttgtctc 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tatatataattgatctcagcttcctaaaaattgaattctgtctctctgtctctttgtctc 34
Query: 269 tctttttctctgtctctctgtctct--gtctct 299
||| | ||||||||||||||||||| ||||||
Sbjct: 33 tctgtctctctgtctctctgtctctctgtctct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 856
Length adjustment: 10
Effective length of query: 445
Effective length of database: 846
Effective search space: 376470
Effective search space used: 376470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_c19.g1 MSMg01no449_c19.g1 CHROMAT_FILE:
MSMg01no449_c19.g1 PHD_FILE: MSMg01no449_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:43 2005
(335 letters)
>mm_chr8_104598842_104599576
Length = 735
Score = 580 bits (300), Expect = e-170
Identities = 323/334 (96%), Gaps = 6/334 (1%)
Strand = Plus / Plus
Query: 2 tatactaatttctttagataagtttcttaaataaaggtagcttttaactcaatgattctt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tatactaatttctttagataagtttcttaaataaaggtagcttttaactcaatgattctt 267
Query: 62 aatattctaattctaaaatacctttttctatgtgtttatgtgtgtatgtatgcatatata 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aatattctaattctaaaatacctttttctatgtgtttatgtgtgtatgtatgcatat--- 324
Query: 122 tacatatatatatatatatatactgaatatcagttaaaattttgaagatttgacatacaa 181
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 325 ---atatatatatatatatatactgaatatcagttaaaattttgaagatgtgacatacaa 381
Query: 182 ctctttaaagtaatttggtactttaatgcatccttaaaaagtacttcgaaatctcaaaat 241
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 382 ctctttaaagtaatttggtactttaatgcatccttaaaaagaacttcgaaacctcaaaat 441
Query: 242 caaaagtattttgtgcaattttgtaaagatttttaatgggattttgacaaagtcaatcta 301
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 442 cgaaagtattttgtgcaattttgtaaagatttttaatgggatttcgacaaagtcaatcta 501
Query: 302 aatgaatgggttcatttcagtttaaaacaatcac 335
||||||||||||||||||||||||||||||||||
Sbjct: 502 aatgaatgggttcatttcagtttaaaacaatcac 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
