Query= MSMg01no450_b20.b1 MSMg01no450_b20.b1 CHROMAT_FILE:
MSMg01no450_b20.b1 PHD_FILE: MSMg01no450_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:55 2005
(606 letters)
>mm_chr8_17782473_17783479
Length = 1007
Score = 1131 bits (585), Expect = 0.0
Identities = 597/601 (99%), Gaps = 1/601 (0%)
Strand = Plus / Minus
Query: 7 ggaattcagtctttgcctac-catcatgggctacatgagactcagtctggaaaaagataa 65
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ggaattcagtctttggctacacatcatgggctacatgagactcagtctggaaaaagataa 748
Query: 66 attaataaaagtgaaatattctacaggaaattaactatgagaaccacacaaaaagtattt 125
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 747 attaataaaagtgaaatattctacaggaaattaactatgataaccacacaaaaagtattt 688
Query: 126 gtaaatttcatataaattttagcaactctcctgtcttttttcctctttctaagaatacta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gtaaatttcatataaattttagcaactctcctgtcttttttcctctttctaagaatacta 628
Query: 186 cacagatgagttaatgcaagcctttccctaccatacccccacacccacgatttgaagtat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cacagatgagttaatgcaagcctttccctaccatacccccacacccacgatttgaagtat 568
Query: 246 attgagggctattgtcaaattccctgaggtaaattccactttaaaaggtaaaaggacagc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 attgagggctattgtcaaattccctgaggtaaattccactttaaaaggtaaaaggacagc 508
Query: 306 acttcactccctcctgggaagaagtaccaaggagtagggtcctccaatctcagcctgggt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 acttcactccctcctgggaagaagtaccaaggagtagggtcctccaatctcagcctgggt 448
Query: 366 ttaatggctgcattcatcaacatgctaatttatgttgatttatcaagacaggatgattgt 425
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 447 ttaatggctgcattcatcaacatgctaatttatgttgatttatcaagacatgatgattgt 388
Query: 426 ggtgataaggcttcctgatttgtgcttctaaagcagaagtgtgctgcagtgatggatgtg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggtgataaggcttcctgatttgtgcttctaaagcagaagtgtgctgcagtgatggatgtg 328
Query: 486 cctctcccgttgcagaaatggatcttgttctgcagttaatgtttcagagaactgacttca 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cctctcccgttgcagaaatggatcttgttctgcagttaatgtttcagagaactgacttca 268
Query: 546 ttaggcagaacttgcctaatgacatcatgaatttgtttcattttatcaaattgcattaat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttaggcagaacttgcctaatgacatcatgaatttgtttcattttatcaaattgcattaat 208
Query: 606 t 606
|
Sbjct: 207 t 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1007
Length adjustment: 10
Effective length of query: 596
Effective length of database: 997
Effective search space: 594212
Effective search space used: 594212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_b20.g1 MSMg01no450_b20.g1 CHROMAT_FILE:
MSMg01no450_b20.g1 PHD_FILE: MSMg01no450_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:55 2005
(362 letters)
>mm_chr8_17601383_17602144
Length = 762
Score = 677 bits (350), Expect = 0.0
Identities = 359/362 (99%)
Strand = Plus / Plus
Query: 1 aaatatgttcaactcttggcactcagaggcaatcggggtgtcggggtgggggagagaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatatgttcaactcttggcactcagaggcaatcggggtgtcggggtgggggagagaaaa 260
Query: 61 gagaggggaacccagtgtcttatttgaaggcatgtccctagtaaaatcatattttcatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaggggaacccagtgtcttatttgaaggcatgtccctagtaaaatcatattttcatta 320
Query: 121 ggcctgcctcagaaaggttgttccaaatctcagtagcaacaagctcagggccaagcccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcctgcctcagaaaggttgttccaaatctcagtagcaacaagctcagggccaagcccat 380
Query: 181 agcccatacatttgcagagtattctgcatccaaattatagcaactctctgttgcttggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcccatacatttgcagagtattctgcatccaaattatagcaactctctgttgcttggaa 440
Query: 241 ttgttttatatattaaaagaatggaattaaacatctgggtgtctcaccaaggggagacaa 300
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgttttaaatagtaaaagaatggaattaaacatctgggtgtctcaccaaggggagacaa 500
Query: 301 acagaaaggtatggctcaggaatgacattacagttagttataaaggtatggtgggtatgg 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 acagaaaggtatggctcaggaatgacattacagttagttataaaagtatggtgggtatgg 560
Query: 361 gt 362
||
Sbjct: 561 gt 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space: 265809
Effective search space used: 265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
