Query= MSMg01no451_a02.b1 MSMg01no451_a02.b1 CHROMAT_FILE:
MSMg01no451_a02.b1 PHD_FILE: MSMg01no451_a02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:06 2005
(683 letters)
>mm_chr8_66705733_66706816
Length = 1084
Score = 1210 bits (626), Expect = 0.0
Identities = 668/682 (97%), Gaps = 5/682 (0%)
Strand = Plus / Plus
Query: 5 gaattctttgttcagttctgagccccattctgataaacagcttcagtgaagtagctgttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgttcagttctgagccccattctgataaacagcttcagtgaagtagctgttc 264
Query: 65 ttagtttttattgaaagcaaatgagatattttttaacagttgctggtattatcttcagct 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttagtttttactgaaagcaaatgagatattttttaacagttgctggtattatcttcagct 324
Query: 125 ttgtccaatcagtggactctgaattttctccattaatagtcataatcacttgaagatatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgtccaatcagtggactctgaattttctccattaatagtcataatcacttgaagatatt 384
Query: 185 aggctctaatactcaaaaacctttttaaagacaatatatgacttttgaatctttcataat 244
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 385 aggctctaatactcaaaaacctttttaaagacaatatatgactttagaatcttttataat 444
Query: 245 gtccattaatgggaggggg-taacttccctaaaatatatccagtggactacgattaaata 303
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtccattaatggggggggggtaacttccctaaaatatatccagtggactacgattaaata 504
Query: 304 actctgggactatctgtttcataaaatggagttgttggtacttcttgtcacctagattta 363
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 505 actctgggactatctgtttcataaaatggagttgttggtacttcttgttacctagattta 564
Query: 364 tgttctggacattctatcatagaatcatcagagaaaaga-gaatcactctttcctcagta 422
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 565 tgttctggacattctatcatagaatcatcagagaaaagaaga-tcactctttcctcagta 623
Query: 423 gaaatgtgacccatatccacatcattgattcc-tatcagcagatgggaccaccacagtat 481
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 624 gaaatgtgacccatatccacatcattgatttcgtatcagcagatgggaccaccacagtat 683
Query: 482 tgataagtgaggtaagctgcacacttgactgatagaatactggcagtcaagttgtaatgt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgataagtgaggtaagctgcacacttgactgatagaatactggcagtcaagttgtaatgt 743
Query: 542 tgcagccatgacatttgctgaaagggtgataagatgtttcacaacaaatggcatgccttt 601
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 744 tgcagccatgacatttgctgaaagggtgataagatgtttcacaacaaatgtcatgccttt 803
Query: 602 aaaactagaacacatcaaacctaagttgtcttatgtcagacacatcaggacgggtataac 661
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 804 aaaactagaacacatcaaacctaagttgtcttatgtcggacacatcaggacgggtgtaac 863
Query: 662 ataaagtattagcagcagtcaa 683
||||||||||||| ||||||||
Sbjct: 864 ataaagtattagc-gcagtcaa 884
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1084
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1074
Effective search space: 722802
Effective search space used: 722802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_a02.g1 MSMg01no451_a02.g1 CHROMAT_FILE:
MSMg01no451_a02.g1 PHD_FILE: MSMg01no451_a02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:06 2005
(652 letters)
>mm_chr8_66900411_66901462
Length = 1052
Score = 716 bits (370), Expect = 0.0
Identities = 379/382 (99%)
Strand = Plus / Minus
Query: 1 tctccggggagtattccaatccattgtctccaggaaggaaaacaaatcaatcttgataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tctccggggagtattccaatccattgtctccaggaaggaaaacaaatcaatcttgataaa 323
Query: 61 ataaaagagagtttagaaatcaaaagggcccttggaggttttaagtggctttgtttttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ataaaagagagtttagaaatcaaaagggcccttggaggttttaagtggctttgtttttat 263
Query: 121 ttatatatttttagatagcagtttcccttcctcccttctctctccctttctcttctctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttatatatttttagatagcagtttcccttcctcccttctctctccctttctcttctctct 203
Query: 181 cctctttccttttgacaagactccatgtatctggacagccctgtggtcactgtgcatttg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cctctttcctttcgacaagactccatgtatctggacagccctgtggtcactgtgcatttg 143
Query: 241 agaagaacttgtgtttatgatatgattgcctctacttcccaggtgctgggattacaggtc 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 142 agaagaacttgtgtttatgacatgattgcctctacttcccaggtgctgggattacaggtc 83
Query: 301 tgtaccgccaggctcagtttaatgttgcactggagatggccgtgcatagatctagtgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 82 tgtaccgccaggctcagtttaatgttgcactggagatggccgtgcatagatcttgtgttt 23
Query: 361 tgtgcctaccagacaagcactc 382
||||||||||||||||||||||
Sbjct: 22 tgtgcctaccagacaagcactc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
