Query= MSMg01no452_p11.b1 MSMg01no452_p11.b1 CHROMAT_FILE:
MSMg01no452_p11.b1 PHD_FILE: MSMg01no452_p11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:41 2005
(639 letters)
>mm_chr8_68761682_68762720
Length = 1039
Score = 1168 bits (604), Expect = 0.0
Identities = 628/636 (98%), Gaps = 2/636 (0%)
Strand = Plus / Plus
Query: 5 gaattcatatttgtttctgccagtatcttgggggtactaccagcttgggatcactttaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatatttgtttctgccagtatcttgggggtactaccagcttgggatcactttaaa 264
Query: 65 ataaattctcaacttgaagcattttgatccagctatttaatgtggattcaggctgcctac 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataaattctccacttgaagcattttgatccagctatttaatgtggattcaggctgcctac 324
Query: 125 agttatagattgttaggg-aagagtacgttctctatcctaagcgtcagcctttgtgaaag 183
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agttatagattgttaggggaa-agtacgttctctatcctaagcgtcagcctttgtgaaag 383
Query: 184 acaattttctttatagtcccctgaaggatatgaaatattttgtttccctcagagcactga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acaattttctttatagtcccctgaaggatatgaaatattttgtttccctcagagcactga 443
Query: 244 catcacagtcctttactgctgcaggtgatatatttggctccaattagtcagtactaatga 303
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 444 catcacagtcctttactgctgcaggtgatatatttggctccaattagccagtactaatga 503
Query: 304 taggcaatgaactttcttccttttactccagtaaaatacaatgttagaagggattggttg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taggcaatgaactttcttccttttactccagtaaaatacaatgttagaagggattggttg 563
Query: 364 agtttacccacctctgaaaaagttcccaggatcagagaccagcttccatgacccacttac 423
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 564 agtttacccacctctgaaaaagatcccaggatcagagaccagcttccatgacccacttac 623
Query: 424 ttatgtcttgacttatgcctgttatttgctttttgcactatgtggaaggactctcagttt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttatgtcttgacttatgcctgttatttgctttttgcactatgtggaaggactctcagttt 683
Query: 484 tccaagtgctccctctactgctacccaaaagtgaggatgctagtggatgtgtccaagtgt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tccaagtgctccctctactgctacccaaaagtgaggatgctagtggatgtgtccaagtgt 743
Query: 544 cttggccatcttctatagtataagtgtgaaacatcttagcccgtgtttctaaggaaacac 603
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 744 cttggccatcttctatagtataagtgtaaaacatcttagcccgtgtttctaaggaaacac 803
Query: 604 agtttcagacaaattgttatacctaatatattattt 639
||||||||| ||||||||||||||| ||||||||||
Sbjct: 804 agtttcagaaaaattgttatacctagtatattattt 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_p11.g1 MSMg01no452_p11.g1 CHROMAT_FILE:
MSMg01no452_p11.g1 PHD_FILE: MSMg01no452_p11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:41 2005
(615 letters)
>mm_chr8_68945814_68946822
Length = 1009
Score = 1125 bits (582), Expect = 0.0
Identities = 604/620 (97%), Gaps = 16/620 (2%)
Strand = Plus / Minus
Query: 1 tttggctgaaaagtaattactctgtatataactatgcaactgagtttctgggaaaaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tttggctgaaaagtaattactctgtatataactatgcaactgagtttctgggaaaaggat 750
Query: 61 actaggcaaagtgttttgttcaggtttaacaagaaagattctagaaaaatttgttttaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 actaggcaaagtgttttgttcaggtttaacaagaaagattctagaaaaatttgttttaga 690
Query: 121 aagatttcttttgaaacatttcaatcaaagcttatgtaaaaactagagatatttctttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 aagatttcttttgaaacatttcaatcaaagcttatgtaaaaactagagatatttctttgc 630
Query: 181 tcagttttgctacggcactcagggtcgcattaaccatcctataacctgtgcctctaaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tcagttttgctacggcactcagggtcgcattaaccatcctataacctgtgcctctaaact 570
Query: 241 aagaaaaacacatgtaataatccttaaagagaaccaaagagccaggtgactatcatgcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aagaaaaacacatgtaataatccttaaagagaaccaaagagccaggtgactatcatgcac 510
Query: 301 cctacagtgggtacaggatctttggagtgtgtggta-----ccccctttgaaaaggtgtc 355
|||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 509 cctacagtgggtacaggatctttggagtgtgtggtattaag-----tttgaaaaggtgtc 455
Query: 356 tcttttcttcctatgtaaaatgggctccaagtatttatgtaaaacaagcttaattagtta 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tcttttcttcctatgtaaaatgggctccaagtatttatgtaaaacaagcttaattagtta 395
Query: 416 aaggagacaaaagtaattaaatacatgaacttgaacattttatacactatatttatcgtg 475
||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 394 aaggagacaaaagtaattaaataca------tgaacattttatacactatatttatcgtg 341
Query: 476 tggtttatatgcataaatatttcagggcaggacataagttgtcagtagtatttgatgtct 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tggtttatatgcataaatatttcagggcaggacataagttgtcagtagtatttgatgtct 281
Query: 536 ttgtgaacccaccttacatcagcacctggcttcttattcaggtagattccgactgggcat 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttgtgaacccaccttacatcagcacctggcttcttattcaggtagattccgactgggcat 221
Query: 596 cccagacttgagcctcagaa 615
||||||||||||||||||||
Sbjct: 220 cccagacttgagcctcagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1009
Length adjustment: 10
Effective length of query: 605
Effective length of database: 999
Effective search space: 604395
Effective search space used: 604395
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
