Query= MSMg01no453_g01.b1 MSMg01no453_g01.b1 CHROMAT_FILE:
MSMg01no453_g01.b1 PHD_FILE: MSMg01no453_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:14 2005
(452 letters)
>mm_chr8_25894983_25895835
Length = 853
Score = 837 bits (433), Expect = 0.0
Identities = 445/449 (99%), Gaps = 1/449 (0%)
Strand = Plus / Plus
Query: 5 gaattccataacttacactgaattcatgggagttatcatacagataccaat-aaaaaaaa 63
||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattccataactaaaactgaattcatgggagttatcatacagataccaataaaaaaaaa 264
Query: 64 agagataagaggctttgctattcagttactttccttttattcatcaatttattgacctgt 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agagataagaggcttcgctattcagttactttccttttattcatcaatttattgacctgt 324
Query: 124 ttatcctacttgtggtctagaatgcttgaccctatgtttaatgctttaaaagaaagctca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttatcctacttgtggtctagaatgcttgaccctatgtttaatgctttaaaagaaagctca 384
Query: 184 aaatctcaggcaggggctggagagatggctcagtggctaaaagtacccactgctctttgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaatctcaggcaggggctggagagatggctcagtggctaaaagtacccactgctctttgc 444
Query: 244 agagggcccaaattcagttcttagcgcccctatggaggctcatgactgtctgcagttcca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agagggcccaaattcagttcttagcgcccctatggaggctcatgactgtctgcagttcca 504
Query: 304 gttctacaccctcttctggtttctacagtcaagcctgtggtatgcatgtatacctatagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gttctacaccctcttctggtttctacagtcaagcctgtggtatgcatgtatacctatagg 564
Query: 364 cactcacaaagatacatacaataaaaaaaaatgaatcagtcattaaaacatttcctttat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cactcacaaagatacatacaataaaaaaaaatgaatcagtcattaaaacatttcctttat 624
Query: 424 gctacgggaagtaatacagatggcataag 452
|||||||||||||||||||||||||||||
Sbjct: 625 gctacgggaagtaatacagatggcataag 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 853
Length adjustment: 10
Effective length of query: 442
Effective length of database: 843
Effective search space: 372606
Effective search space used: 372606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_g01.g1 MSMg01no453_g01.g1 CHROMAT_FILE:
MSMg01no453_g01.g1 PHD_FILE: MSMg01no453_g01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:14 2005
(469 letters)
>mm_chr8_26053260_26054124
Length = 865
Score = 849 bits (439), Expect = 0.0
Identities = 460/469 (98%), Gaps = 4/469 (0%)
Strand = Plus / Minus
Query: 1 catccccttttcttgatgctgcagggacccttaaagtcaccaaagtttattgtctcacta 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 665 catccccttttcttgatgctgcagtgacccttaaagtcaccaaagtttattgtctcacta 606
Query: 61 gtatttctaattcactaactgagaactctcagacttcccatgagaaaaaaaaaaacacat 120
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 605 gtatttctaattcactaactgagaactctcagacttcccatgag----aaacaaacacat 550
Query: 121 tcttgttacgtgaggccacaggagttccaggggtttatgtattactgtcacagggtttct 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tcttgttacgtgagaccacaggagttccaggggtttatgtattactgtcacagggtttct 490
Query: 181 tatcctaaagagattggtgccatggtgtgccaccgtcaccaggttaaaatatgtgtgtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tatcctaaagagattggtgccatggtgtgccaccgtcaccaggttaaaatatgtgtgtgt 430
Query: 241 ggcctgaatgctggacagtgagggataggtagcaggtcacaaggaaattgacacctgttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggcctgaatgctggacagtgagggataggtagcaggtcacaaggaaattgacacctgttg 370
Query: 301 aggagactagggtctgtgttaggatgttgccaagtagtctccgctaaaacacgaatatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aggagactagggtctgtgttaggatgttgccaagtagtctccgctaaaacacgaatatat 310
Query: 361 atatcaggctctgtttcacaagatccatccatgttccatccacgacccaagattggccac 420
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 309 atatcaggctctgtttcacaagatccatccatgttccatccacgatccaagattggccac 250
Query: 421 cactcaaaagaaagactttatcttcagaactaattagctagacccatta 469
|||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 249 cactcaaaagaaagacattatcttcagaactaattagctagacccatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 865
Length adjustment: 10
Effective length of query: 459
Effective length of database: 855
Effective search space: 392445
Effective search space used: 392445
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
