Query= MSMg01no454_c04.b1 MSMg01no454_c04.b1 CHROMAT_FILE:
MSMg01no454_c04.b1 PHD_FILE: MSMg01no454_c04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:14 2005
(192 letters)
>mm_chr8_12635683_12636274
Length = 592
Score = 369 bits (191), Expect = e-107
Identities = 191/191 (100%)
Strand = Plus / Minus
Query: 1 caccatattcagggtggcctgggcttaggagttgctgttctgtgtggtggttactgtaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 caccatattcagggtggcctgggcttaggagttgctgttctgtgtggtggttactgtaca 332
Query: 61 cagctgtctggtatttcagcaaattgtttaggactttatatgtgctttgttagcccatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cagctgtctggtatttcagcaaattgtttaggactttatatgtgctttgttagcccatgg 272
Query: 121 ccgtatgtattttcatgcataatggatccaataataaggcttagggtacagctcagtgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ccgtatgtattttcatgcataatggatccaataataaggcttagggtacagctcagtgcg 212
Query: 181 agagcacttgc 191
|||||||||||
Sbjct: 211 agagcacttgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 592
Length adjustment: 8
Effective length of query: 184
Effective length of database: 584
Effective search space: 107456
Effective search space used: 107456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no454_c04.g1 MSMg01no454_c04.g1 CHROMAT_FILE:
MSMg01no454_c04.g1 PHD_FILE: MSMg01no454_c04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:14 2005
(219 letters)
>mm_chr8_12469542_12470159
Length = 618
Score = 400 bits (207), Expect = e-116
Identities = 216/219 (98%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 1 actgagctgagccctggttgtagacttccagggtggagagctgtgaaataaacgcctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgagctgagccctggttgtagacttccagggtggagagctgtgaaataaacgcctgtg 260
Query: 61 ttctgagccccgagtttcatgctggtcatggcaactggctttgaatcggctatagctgga 120
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 261 ttctgagccccgagtttcatgctggccatggcaactggctttgaat-ggctatagctgga 319
Query: 121 tgaatccaggtatgatgtcacaggatcagacgctgacctggaagctaggaacctcatgct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 320 tgaatccaggtatgatgtcacaggatcagacgctgacctggaagctaggaacgtcatgct 379
Query: 181 gccttgggacaaactgaccgctttgtcagcttcacacag 219
|||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gccttgggacaaactgaccgctttgtcagcttcacacag 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 618
Length adjustment: 9
Effective length of query: 210
Effective length of database: 609
Effective search space: 127890
Effective search space used: 127890
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
