NTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCATTGAATTCCGGAGAATGGTAAATATTGAGAAAGACACATTTTT
TAAAGTTATAAAAAGTCCATTAATTTTAACAACATATTTTATCACATAGT
CATATCCCCATCAGATAATTACAGCATTTACCCAGTGTATAAACTATCTT
ATTTTACCTCTACTTTGTTTTAATGTTCTGTTTTAGGCTCAGTGTATATT
TCATACTTAAGTCACAGTTGAGAGCAGCCATACTTTTACTAGCTAAGTAG
CCACAAGTAGACAAGGAAGAATAATCAGAAGACCATAAACCTTTTCATAG
AGGAGGGTGATCAAAGACTTTCTGGTGATAACAATCCTCTGAGTGAAGAA
CTAGTGAATTAAGACTGCTGTCGTTAGTTAGTTAGTTAGTTAGTTAGTTA
GTTAGTTAGTTAGTTAGACAACTATTTATTTGGGAAAACATTCAGATGGC
CTTTGAAATCAGCAGATCCTAAAGGAGACACTGGGAAGGTAGATGGAGGG
AAAGATGCTCATGGTCTTAGCCTCAGTAGAAGGGCTGTATTGGGAACAAG
ATCTATCTTTTAAAAACTTTGAATGGGGGAAATCACTGGAAGTCCCAAAA
TTCTTCCCTATGAGAATGGAAAAGGGAAACCTTGGTGAAATGAAAACCTG
GCCGGTTCCCGTTGGGAAATATATGGTACCCGGAAAATTTTCTACAAACC
TCAAA

CGCGTTGTTCCGGGGTTCTGTTTTGGCCCTTTTTCTAAAAAATTGGGGAC
GGTGAATGATCCCACGGATTTTAATCCCAGGAGGACCCGCGCGTGTATAT
TTTGATTATATACTACAACTCTTCACGGTCGAGTTTTAAGGCAACGATTG
CTTTTTCTGTTGCCCGGAGCGTTATCCCGGTCGTTCTCCGAGATTATACC
AAGCGCACGCGTTTTCACCTATAAAATATTATTAGACCCGCGCATATTTT
CTCTTTGGCCCCACCGCGNTTTTNCTTTTTTCCTTCNTTNNCCGGGCAAA
AGAAATAGGGGGGGTAAGGGCCCTGGGGCCGGGTGCCCCGGGCCCCCGGG
GTCCTCGCACAAAAAAACAAATTGTTAAAGGGGGTTGGGGAAACACTTAA
ATAGAAAGTACACCAGAAGACAATTCATGGCTGAAAATGAAAAGTTACTT
GGGGGAAATTTTTTCCTATGATGGTTTTGGAACAAAGAATGAAAGGGCCG
GGGAGAAGAACAACCGGGGCTTTAGGGGGGGAAACAAGGGCCAGGGGAAA
ATTTAATCCCCCTAAGCCCCAGGGGGAAAAGGGGACCCCTTTGTGGGGGA
GGGGTTTTAAAAAAAAAAAAAAAAAAGAGGGGGGAAATCTCCCCCGGGGG
TAAATTTTTTTCCTCTAAACCTCCCAAAAAAAAAAAAAAAAAAATGTGGT
TTTTATA

Query= MSMg01no454_f07.b1 MSMg01no454_f07.b1 CHROMAT_FILE:
MSMg01no454_f07.b1 PHD_FILE: MSMg01no454_f07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:29 2005
         (512 letters)



>mm_chr8_105211628_105212540
          Length = 913

 Score =  774 bits (400), Expect = 0.0
 Identities = 481/510 (94%), Gaps = 6/510 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattgaattccggagaatggtaaatattgagaaagacacattttttaaagttata 64
           |||||||||||| || ||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 205 gaattcattgaaatctggagaatggtaaatattcagaaagacacatttttaaaagttata 264

                                                                       
Query: 65  aaaagtccattaattttaacaacatattttatcacatagtcatatccccatcagataatt 124
           |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaagtccattaattttaaccatatattttatcacatagtcatatccccatcagataatt 324

                                                                       
Query: 125 acagcatttacccagtgtataaactatcttattttacctctactttgttttaatgttctg 184
           |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 325 acagcatttacccagtatataagctatcttattttacttctactttgttttaatgttctg 384

                                                                       
Query: 185 ttttaggctcagtgtatatttcatacttaagtcacagttgagagcagccatacttttact 244
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| 
Sbjct: 385 ttttaggctcagtgtatatttcatactgaagtcacagttgagagcagccatacttttaca 444

                                                                       
Query: 245 agctaagtagccacaagtagacaaggaagaataatcagaagaccataaaccttttcatag 304
           |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 445 agctaagtagccacaagtagtcagggaagaataatcagaagaccataaaccttttcatag 504

                                                                       
Query: 305 aggagggtgatcaaagactttctggtgataacaatcctctgagtga-agaactagtgaat 363
           |||||||||||||||||||||||||||||| ||||||||||||| | ||||||| |||| 
Sbjct: 505 aggagggtgatcaaagactttctggtgatagcaatcctctgagttagagaactaatgaaa 564

                                                                       
Query: 364 taagactgctgtcgttagttagttagttagttagttagttagttagttagttagttagac 423
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    ||
Sbjct: 565 taagactgctgtccttagttagttagttagttagttagttagttagttagttag----ac 620

                                                                       
Query: 424 aactatttatttgggaaaacattcagatggcctt-tgaaatcagcagatcctaaaggaga 482
           ||||||||||||| |||||||||||||||||||| |||| |||||||| || ||||||||
Sbjct: 621 aactatttatttgagaaaacattcagatggccttctgaactcagcagacccaaaaggaga 680

                                         
Query: 483 cactgggaaggtagatggagggaaagatgc 512
           ||||||||| ||||||||||||||||||||
Sbjct: 681 cactgggaaagtagatggagggaaagatgc 710


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 913
Length adjustment: 10
Effective length of query: 502
Effective length of database: 903
Effective search space:   453306
Effective search space used:   453306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)