Query= MSMg01no457_b09.b1 MSMg01no457_b09.b1 CHROMAT_FILE:
MSMg01no457_b09.b1 PHD_FILE: MSMg01no457_b09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:09 2005
(404 letters)
>mm_chr8_91744876_91745679
Length = 804
Score = 774 bits (400), Expect = 0.0
Identities = 403/404 (99%)
Strand = Plus / Plus
Query: 1 ggacacgtctgacattcagagaccttgggctcaaatggggactgataagattctactcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggacacgtctgacattcagagaccttgggctcaaatggggactgataagattctactcag 260
Query: 61 tccctcaccatctgctgcctgcctggatcacaattttcagctctaagcagtgggttttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccctcaccatctgctgcctgcctggatcacaattttcagctctaagcagtgggttttga 320
Query: 121 ttacatattcctgcctcctccaatctggtccttctattttttgttaatcttgagcctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacatattcctgcctcctccaatctggtccttctattttttgttaatcttgagcctccc 380
Query: 181 ggtactgcatcctaacaagtgattttaatgtctaatggtggtgtaaaatctattgagcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtactgcatcctaacaagtgattttaatgtctaatggtggtgtaaaatctattgagcat 440
Query: 241 gtgccacacgtgctgcattttgctgaagaccatgaatccccacagtacaggaatgaagag 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgccacacgtgcagcattttgctgaagaccatgaatccccacagtacaggaatgaagag 500
Query: 301 gtagtcacactgatcgtaacataatggatgactcttgatgaagcagagcttcctcatgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtagtcacactgatcgtaacataatggatgactcttgatgaagcagagcttcctcatgtg 560
Query: 361 agtcaagatgtcaggacttcctacagaagcaactttatttaaga 404
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtcaagatgtcaggacttcctacagaagcaactttatttaaga 604
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_b09.g1 MSMg01no457_b09.g1 CHROMAT_FILE:
MSMg01no457_b09.g1 PHD_FILE: MSMg01no457_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:09 2005
(379 letters)
>mm_chr8_91937130_91937908
Length = 779
Score = 571 bits (295), Expect = e-167
Identities = 309/319 (96%), Gaps = 10/319 (3%)
Strand = Plus / Minus
Query: 66 tatgttcagtattttttttaagacttatatttttatttcaggtatgggaatacactgtct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 tatgttcagtattttttttaagacttatatttttatttcaggtatgggaatacactgtct 720
Query: 126 ctgtcttcagacacaccagaagagggcatcagattcccattatagatgtttttgagccac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 ctgtcttcagacacaccagaagagggcatcagattcccattatagatgtttttgagccac 660
Query: 186 catgtggttgctgggaattgaactcaggacctctggaagaacagtcagtgctcttaacca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 catgtggttgctgggaattgaactcaggacctctggaagaacagtcagtgctcttaacca 600
Query: 246 ctga-----tttttctctccagcccatgttcagcgtttctacaaccacctaggcccacac 300
|||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ctgagccac-----ctctccagcccatgttcagcgtttctacaaccacctaggcccacac 545
Query: 301 tcaaatgtaatgagagaaaactgtccagatgttgggctccggcatctgctcctctgcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcaaatgtaatgagagaaaactgtccagatgttgggctccggcatctgctcctctgcctt 485
Query: 361 gcatgaagtcatcttggtt 379
|||||||||||||||||||
Sbjct: 484 gcatgaagtcatcttggtt 466
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
