Query= MSMg01no457_f16.b1 MSMg01no457_f16.b1 CHROMAT_FILE:
MSMg01no457_f16.b1 PHD_FILE: MSMg01no457_f16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:31 2005
(548 letters)
>mm_chr8_75517187_75518134
Length = 948
Score = 764 bits (395), Expect = 0.0
Identities = 410/415 (98%)
Strand = Plus / Minus
Query: 4 ggaattcattcaatatccgaatggtattctattgcatagctatatcatactttatttatc 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 ggaattcattcaataactgaatggtattctattgcatagctatatcatactttatttatc 841
Query: 64 cacattccacttaagcattcaagtcatctcctctttctggttactttacttgtcctagtt 123
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 cacattccacttgagcattcaagtcatctcctctttctggttactttacttgtcctagtt 781
Query: 124 tcaatgtgaaccatccctcactgactcatgtgtttgaacacttgattcctgactgatggc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tcaatgtgaaccatccctcactgactcatgtgtttgaacacttgattcctgactgatggc 721
Query: 184 attcttttggaagattatgaaacttttggataaaagaactagctgggtgacatcgatgaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 attcttttggaagattatgaaacttttggataaaagaactagctgggtgacatcgatgaa 661
Query: 244 tagagttgggctgtgagtgttaaaccctggtcctgcttcatggctagttccatgtaacac 303
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 660 tagagttgggctgtgagtgttaaaccctggccctgcttcatggctagttccatgtaacac 601
Query: 304 acagttcccacacattccttctgtcacagtcaaatgtactgttcctgctatacttaccca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 acagttcccacacattccttctgtcacagtcaaatgtactgttcctgctatacttaccca 541
Query: 364 ccaggatacactacttgctctgaactgaggaataacagagtcatcctctcttaat 418
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 540 ccaggatacactacttgctctgaactgaggaataacagagtcatcctcccttaat 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_f16.g1 MSMg01no457_f16.g1 CHROMAT_FILE:
MSMg01no457_f16.g1 PHD_FILE: MSMg01no457_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:32 2005
(444 letters)
>mm_chr8_75427813_75428656
Length = 844
Score = 754 bits (390), Expect = 0.0
Identities = 423/444 (95%), Gaps = 16/444 (3%)
Strand = Plus / Plus
Query: 1 catccctgctgttcactgtattactaaggagcgataatgcactagagcagcattagtact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 catccctgctgttcactgtattactaaggagcgataatgcactagagcagcattagttct 260
Query: 61 cttaactcacagtagagacgtggtctggctatgtcaggctggagaaggcctaaggcagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttaactcacagtagagacgtggtctggctatgtcaggctggagaaggcctaaggcagac 320
Query: 121 agctggaggaggggacagtacctgtgctccagacccacaggtgataatacctccatatct 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctggaggaggggacagcacctgtgctccagacccacaggtgataatacctccatatct 380
Query: 181 gagaaccttgagggccagctcagccgaggtcttcttgctttcgaattttgtttattctac 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagaatcttgagggccagctcagccgaggtcttcttgctttcgaattttgtttattctac 440
Query: 241 tttctttctgttcagcatttgtgatttacttagcaaaatgatagggaaaaatgagattcc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttctttctgttcagcatttgtgatttacttagcaaaatgatagggaaaaatgagattct 500
Query: 301 gaggccagaatcttctaggaaatgggaccaacttgatgcatcctttcatatgggaaaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaggccagaatcttctaggaaatgggaccaacttgatgcatcctttcatatgggaaaata 560
Query: 361 gttcaggataaaagaattggggcttagtgttggttgtactgtggaaatctagagttaaat 420
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 gttcaggataaaagaattggggct----------------gtggaaatctagagttaaat 604
Query: 421 gcccgctctctgaggcgaaggcct 444
|||||||||||||||| |||||||
Sbjct: 605 gcccgctctctgaggccaaggcct 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
