Query= MSMg01no458_d17.b1 MSMg01no458_d17.b1 CHROMAT_FILE:
MSMg01no458_d17.b1 PHD_FILE: MSMg01no458_d17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:45 2005
(650 letters)
>mm_chr8_116492367_116493416
Length = 1050
Score = 1218 bits (630), Expect = 0.0
Identities = 645/650 (99%)
Strand = Plus / Plus
Query: 1 agagaatcctacgagacatcttctatcataaatctggtggagagtggagatagggtcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagaatcctacgagacatcttctatcataaatctggtggagagtggagatagggtcgct 260
Query: 61 tgtgttgctgcctggcaggagttgacgaattctcggcaaaacgtagcaagtatgggttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgttgctgcctggcaggagttgacgaattctcggcaaaacgtagcaagtatgggttgg 320
Query: 121 gttgcttcattgtgggcaagtgttaacttcctcctgcctcttccctcattagggtcactc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgcttcattgtgggcaagcgttaacttcctcctgcctcttccctcattagggtcactc 380
Query: 181 ttccatagctcctttctcctcctctgagagaagagctattgaaaagtaggacagaggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttccatagctcctttctcctcctctgagagaagagctattgaaaagtaggacagaggatt 440
Query: 241 gtggtatcaagcaatactctacttgaaacttttctccttccccctactcaccacgggatc 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggtatcaagcaaaactctacttgaaacttttctccttccccctactcaccacgggatc 500
Query: 301 ttgaagaagctagctcaccacgctttcttactccctggtattcgtgcctttatgaattcc 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgaagaagccagctcaccacgctttcttactccctggtattcgtgcctttatgaattcc 560
Query: 361 ctctgaccggaaatagacatgacagatctaactaatagggtactgcagaaatgatacctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 ctctgaccggaaatagacatgacagatctaactaatagggtactgcagaaacgatacctt 620
Query: 421 ccaaagtagagccacataaaacaagctgcctgtcccttccatccttttaaatcccttaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccaaagtagagccacataaaacaagctgcctgtcccttccatccttttaaatcccttaca 680
Query: 481 ctgggggaaggcagttttgcatcacaagcacagctgaacaaccaaaaagatgaatttcca 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 681 ctgggggaaggcagttttgcatcacaagcacagctgaacaaccaaaaagatggatttcca 740
Query: 541 aagagtaatcacttggcactgctgctggacagccatggcttgccagccatatggaggaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagagtaatcacttggcactgctgctggacagccatggcttgccagccatatggaggaac 800
Query: 601 tattgggacctcagtgacctcccaagagaacccccagggccacagtctta 650
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tattgggacctcagtgacctcccaagagaacccccagggccacagtctta 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_d17.g1 MSMg01no458_d17.g1 CHROMAT_FILE:
MSMg01no458_d17.g1 PHD_FILE: MSMg01no458_d17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:46 2005
(614 letters)
>mm_chr8_116612194_116613207
Length = 1014
Score = 917 bits (474), Expect = 0.0
Identities = 534/556 (96%), Gaps = 7/556 (1%)
Strand = Plus / Minus
Query: 1 actaggggctactagtctcaaggctagttacacaacactggtgaatgcatcccagaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 actaggggctactagtctcaaggctagttacacaacactggtgaatgcatcccagaagca 492
Query: 61 ttcaggaaaactctgtctcctatgttacagcgggatgtcattggccacgacaccaggata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttcaggaaaactctgtctcctatgttacagcgggatgtcattggccacgacaccaggata 432
Query: 121 ctccctcttctcatgagccactatgaaatggaaaaaagagagacagctccaaaccgtgtg 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 431 ctccctcttctcatgagccactgtgaaatggaaaaaagagagacagctccaaaccgtgtg 372
Query: 181 catcaaccatttatccttttcaaagcatgctctacaatattcagggccttgagtg--gag 238
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 371 catcaaccatttatcctttgcaaagcatgctctacaatattcagggccttgagtggagag 312
Query: 239 agcagggtggtattctaccaactcctgacatctcatacccgacactgaagagtcttgcac 298
|| ||||||| | | || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 311 agtagggtgg-a-gccactaactcctgatatctcatacccaacactgaagagtcttgcac 254
Query: 299 ttttcttagaaacttaaggctgagcaggactcagctaacactgcctgtgagatctccctc 358
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 253 ttttcttagaaacttaaggctgagctggactcagctaacagtgcctgtgagatctccctc 194
Query: 359 ttttcctccttcccttctatctgtacccccttctcttccccttttctcccttcttcttcc 418
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 193 ttttcctccttcccttctatctgtacccctttctcttccccttttctcc---cttcttcc 137
Query: 419 cttaccccccttcccagaccccttgtatttgaggcaagcactctgtcattcacctgtatc 478
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 136 cttaccccccttcctagaccccttgtatttgaggcaagcactctgtcattcacctgaatc 77
Query: 479 ttagcctgtgctttgttgagataggctctcacccaggctgatgttaacctcataactctc 538
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 76 ctagcctgtgctttgttgagttaggctctcacccaggctgatgttaacctcataactctc 17
Query: 539 ctaggacccttcacct 554
||||||||||||||||
Sbjct: 16 ctaggacccttcacct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
