Query= MSMg01no458_l21.b1 MSMg01no458_l21.b1 CHROMAT_FILE:
MSMg01no458_l21.b1 PHD_FILE: MSMg01no458_l21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:25 2005
(558 letters)
>mm_chr8_98429457_98430414
Length = 958
Score = 569 bits (294), Expect = e-166
Identities = 347/369 (94%), Gaps = 13/369 (3%)
Strand = Plus / Minus
Query: 200 gcatggtggcacattgcctttaatcccagcacttgggaggcagaggcagatggatttctg 259
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 948 gcatggtggcaca-tgcctttaatcccagcacttgggaggcagaggcag-tggatttctg 891
Query: 260 agtttgaggccagcctggtctacagagtaagttccaggacaacca-ggtctacacagaga 318
|||| |||||||||||||||||||||| |||| ||||||||||| || |||||||||||
Sbjct: 890 agttcaaggccagcctggtctacagagtgagtttcaggacaaccatgg-ctacacagaga 832
Query: 319 aaccctgtctcgaaaaaccaaaaagaaaagaa----aaaaac-aaaacaaaaacaa---- 369
||||||||||||||||||||||||||||| || |||||| |||||||||||||
Sbjct: 831 aaccctgtctcgaaaaaccaaaaagaaaacaaaaacaaaaacaaaaacaaaaacaaaaac 772
Query: 370 aaaaaaaagcaaagaatccagcagagtcctacaggtctgaggtcaattgtgctgccatgc 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 aaaaaaaagcaaagaatccagcagagtcctacaggtctgaggtcaattgtgctgccatgc 712
Query: 430 agattcatctctcatttttttttctaacagacttattaccaaatctataataggaagtac 489
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 711 agattcatctctcgtttttttttctaacagacttattaccaaatctataatagaaagtac 652
Query: 490 ctttgttcccaccacccattcgttggntgatttccttcctcaatattcccacatgcccac 549
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 651 ctttgttcccaccacccattcgttagttgatttccttcctcaatattcccacatgcccac 592
Query: 550 tcatatgtt 558
|||||||||
Sbjct: 591 tcatatgtt 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_l21.g1 MSMg01no458_l21.g1 CHROMAT_FILE:
MSMg01no458_l21.g1 PHD_FILE: MSMg01no458_l21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:25 2005
(285 letters)
>mm_chr8_98275396_98276080
Length = 685
Score = 551 bits (285), Expect = e-161
Identities = 285/285 (100%)
Strand = Plus / Plus
Query: 1 tagcctctgtccacttgacaggccattacagatcaaggcacttacctcctgcaaatgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagcctctgtccacttgacaggccattacagatcaaggcacttacctcctgcaaatgatg 260
Query: 61 tgggaactgcataaagtggctgatagaagccaggtgctgacaatactgaggatagtcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggaactgcataaagtggctgatagaagccaggtgctgacaatactgaggatagtcctt 320
Query: 121 caatctgccaaaataaattgttcattcatcatttcatgtatgtacagagaaaaggtgggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatctgccaaaataaattgttcattcatcatttcatgtatgtacagagaaaaggtgggg 380
Query: 181 ttttttcagacactaaaattgaaaatcatttctgttactttgaagagaatgtcaaatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttttcagacactaaaattgaaaatcatttctgttactttgaagagaatgtcaaatgga 440
Query: 241 agactaccagccaagagtagtacacacacacaagcccagaattaa 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agactaccagccaagagtagtacacacacacaagcccagaattaa 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
