Query= MSMg01no459_m24.b1 MSMg01no459_m24.b1 CHROMAT_FILE:
MSMg01no459_m24.b1 PHD_FILE: MSMg01no459_m24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:52 2005
(356 letters)
>mm_chr8_10378137_10378892
Length = 756
Score = 534 bits (276), Expect = e-156
Identities = 304/318 (95%), Gaps = 9/318 (2%)
Strand = Plus / Plus
Query: 40 tctctctctctctctctctctctctctctctctctctctctctctctctttctcacacac 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tctctctctctctctctctctctctctctctctctctctctctctctctttctcacacac 299
Query: 100 atcttagcttcaaccctctggaataatctatccagctattccttgagttccagtaaactg 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atcttagcttcaaccctctggaataatctatccagctattccttgagttccagtaaactg 359
Query: 160 ggtgctgttccttaacacaattcttgatgatttaaataaattatttattcctctacttct 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ggtgctgttccttaacacaattcttgatgatttaaataaattatttattcctctacttct 419
Query: 220 tcctcctttgccctctttcctgcttcctttgcccatttccatgcctcttcctctttttcc 279
||||||||||||||||||||||||||||||||||| |||| |||||||||||| |
Sbjct: 420 tcctcctttgccctctttcctgcttcctttgcccacttccctgcctcttcctc------c 473
Query: 280 tcctcctcctcttcctcctcct---ccagcttcttacttcctccatcacactattaataa 336
||||||||||||||||| |||| ||| || ||||||||||||||||||||||||||||
Sbjct: 474 tcctcctcctcttcctcttccttctccacctccttacttcctccatcacactattaataa 533
Query: 337 agaccaaaaccaagctct 354
||||||||||||||||||
Sbjct: 534 agaccaaaaccaagctct 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 33
Number of successful extensions: 33
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_m24.g1 MSMg01no459_m24.g1 CHROMAT_FILE:
MSMg01no459_m24.g1 PHD_FILE: MSMg01no459_m24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:52 2005
(395 letters)
>mm_chr8_10548859_10549654
Length = 796
Score = 719 bits (372), Expect = 0.0
Identities = 390/396 (98%), Gaps = 1/396 (0%)
Strand = Plus / Minus
Query: 1 tgagtaggcaggcacttgcatgcctccagagtcctcaatcagtgttcagtacagctgtg- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tgagtaggcaggcacttgcatgcctccagagtcctcaatcagtgttcagtacagctgtgc 537
Query: 60 cccctatattgatggcatggggccatggcctctgaatatgaaaggtactcccaggcttct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 536 cccctatattgatggcatggggccatggcctctgaatatgaaaggtactcccagggttct 477
Query: 120 gagccactggaaaaaggatggaagtctgaactcgcatataagtagaccatgacaatgagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gagccactggaaaaaggatggaagtctgaactcgcatataagtagaccatgacaatgagg 417
Query: 180 ttcagatcattgtgaaatggctgagatcttactttaattgcattccggctttgaaaaaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ttcagatcattgtgaaatggctgagatcttactttaattgcattccggctttgaaaaaaa 357
Query: 240 gaatccttcattcaaatactgggatacagtcgactgctttccagtggacagaggacttta 299
|||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||
Sbjct: 356 gaatccttcattcaaatactgggatataggcgactgctttccagtggacagtggacttta 297
Query: 300 caagatctgtcaagtacagggaaaactctacagataaccaaagatggtggccctgccatc 359
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 296 caagatctgtcaagtacagggaaaactctacagataaccaaagatggtggtcctgccatc 237
Query: 360 atttcgtgttgtgtaatcaggaatatttggagatgt 395
||||||||||||||||||||||||||||||||||||
Sbjct: 236 atttcgtgttgtgtaatcaggaatatttggagatgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 796
Length adjustment: 9
Effective length of query: 386
Effective length of database: 787
Effective search space: 303782
Effective search space used: 303782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
