Query= MSMg01no460_g09.b1 MSMg01no460_g09.b1 CHROMAT_FILE:
MSMg01no460_g09.b1 PHD_FILE: MSMg01no460_g09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:38 2005
(583 letters)
>mm_chr8_19444895_19445876
Length = 982
Score = 698 bits (361), Expect = 0.0
Identities = 524/579 (90%), Gaps = 9/579 (1%)
Strand = Plus / Minus
Query: 7 tcaatcagtggctcaagcagggctctcttaagttccatggtttatggctatctgttcctg 66
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 780 tcaatcactggctcaagcagggctctcttaagttccatggtttatggcaatctgttcctg 721
Query: 67 tctctgatgtgctgagtgattccctgtagccagcacacagccatcctgcctgccttctgc 126
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tctctgatgtgttgggtgattccctgtagccagcacacagccatcctgcctgccttctgc 661
Query: 127 atccctttgcctccttaacctctttgtcttttctatccaatcccaaagcaaggcaaagat 186
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 660 atccctttgcctccttaacctctttgtcttttctatccaattccaaggcaaggcaaagat 601
Query: 187 ggt-gacccagcttccttttaacttgttcctggtagtcattttatgccttgtgtgtttgt 245
| | ||||||| |||| |||| ||||||||| |||||||| |||||||| ||||||||
Sbjct: 600 g-tcgacccaggttccctttatcttgttcctc--agtcattt-atgccttgggtgtttgt 545
Query: 246 gattaagactttaatgcacagtttgtctataagagctcttgagtgttgtttccagagtca 305
| |||||||||||||||||| ||| |||| ||||||||||||||| | ||||||||||
Sbjct: 544 gcttaagactttaatgcacacattggctatgagagctcttgagtgtgggatccagagtca 485
Query: 306 cttattcatttaaataatgacccctgatgagatatattgcataatgttatttaaaattga 365
|||| ||||||| || ||||| |||| ||||||||||||| || |||||| |||||||
Sbjct: 484 cttaatcatttatgtactgaccactgacaagatatattgcatcattttattttaaattga 425
Query: 366 atggccaag-ttgagtctgtaaggggc-tttattacatttagacataagacacaatgaac 423
|||||||| ||||||| || |||| | ||||||||||||||||||||||||||||||||
Sbjct: 424 atggccaatattgagtcagtgaggg-catttattacatttagacataagacacaatgaac 366
Query: 424 ttatagaaaataagggcttattgaaatcaaaaagagggtagagcagggtgaagatttta- 482
|||| ||||| |||| ||||| |||| ||| ||||||||||||||||||||||| | |
Sbjct: 365 ttatggaaaacaaggccttatcgaaagcaataagagggtagagcagggtgaagaaataaa 306
Query: 483 caaggctatggttagtaaagcaatagttccgagtctgtcctaggcctgaccttcccacca 542
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 305 caaggctatggttagtaaagcaatagttctgagtctgccctaggcctgaccttcccacca 246
Query: 543 gggaaattacagtatgatgggcttcctgtcaggcttggg 581
||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 245 gggaatttacagtatgatgggctccctgtcagacttggg 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 982
Length adjustment: 10
Effective length of query: 573
Effective length of database: 972
Effective search space: 556956
Effective search space used: 556956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_g09.g1 MSMg01no460_g09.g1 CHROMAT_FILE:
MSMg01no460_g09.g1 PHD_FILE: MSMg01no460_g09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:38 2005
(596 letters)
>mm_chr8_19281133_19282128
Length = 996
Score = 296 bits (153), Expect = 3e-84
Identities = 228/253 (90%), Gaps = 2/253 (0%)
Strand = Plus / Minus
Query: 1 cttctgagaagccctgctttggccacagcttttacaaattgcttaactgtcctttcatta 60
|||||| ||||||||||||| |||||| ||||| ||||| |||||||||||||||| |
Sbjct: 452 cttctgggaagccctgctttaaccacagtttttataaattccttaactgtcctttcacca 393
Query: 61 caggtgtttgaggtacacaatagaaattcaccacaaatattaagacatcacaactcatcc 120
||||| ||||||||| ||||||||| | |||||||||||||||||||||||| | | ||
Sbjct: 392 caggtatttgaggtatacaatagaagctaaccacaaatattaagacatcacaagtaaccc 333
Query: 121 ttaaatagagaaaatctgtccaagatgtttcagctgctcttgtttcccaaggactggaca 180
|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 332 ttaaatagaggaaatctgtccaagatgtttcagctgctcttgtgtcccaaggactgga-a 274
Query: 181 a-aagagtgttgtctctcttgctctgtgctcactgcatacaaaaagggtctgtaagtaat 239
| |||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||
Sbjct: 273 agaagagtgttgtctctcttgctctgtgctcactgcataccacaagtgtctgtaagaaat 214
Query: 240 gaaggtaactttc 252
||| |||||||||
Sbjct: 213 gaaagtaactttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
