Query= MSMg01no460_p18.b1 MSMg01no460_p18.b1 CHROMAT_FILE:
MSMg01no460_p18.b1 PHD_FILE: MSMg01no460_p18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:24 2005
(402 letters)
>mm_chr8_23632771_23633571
Length = 801
Score = 752 bits (389), Expect = 0.0
Identities = 399/403 (99%), Gaps = 3/403 (0%)
Strand = Plus / Minus
Query: 1 gaatcccaggacactggagcccgaggggacttcagagctacctcacccagcctttgccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaatcccaggacactggagcccgaggggacttcagagctacctcacccagcctttgccac 542
Query: 61 tgtgaagatgtggctggcataagagagagagtctgtaaacgaggagtccctaaacacact 120
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgtgaagatgtggctggcata--agagagagtctgtaaacgaggagtccctaaacacact 484
Query: 121 acctggtgggagtcaatgctacagcaggagacactcaagtgcaacagtacaaagatccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 acctggtgggagtcaatgctacagcaggagacactcaagtgcaacagtacaaagatccta 424
Query: 181 tggagtggaagtgctgggccacacttactgggcctcgttggtggccgtcattccatccgg 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 423 tggagtggaagtgctgggccacacttactgggcctcgttggtggccgttattccatccgg 364
Query: 241 ggcacgtttggtccctgtggtcctggaagggtagagccggggtgaggacaggacagggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ggcacgtttggtccctgtggtcctggaagggtagagccggggtgaggacaggacagggaa 304
Query: 301 gcatatccactgcaaggcatgcaaccaaggctttgtccttggaaggtgtctaggtcacgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gcatatccactgcaaggcatgcaaccaaggctttgtccttggaaggtgtctaggtcacgt 244
Query: 361 gatccctccaagccttgttc-acgctataattcggcaccaacc 402
|||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 243 gatccctccaagccttgttcaacgctataattcggcaccaacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 801
Length adjustment: 9
Effective length of query: 393
Effective length of database: 792
Effective search space: 311256
Effective search space used: 311256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_p18.g1 MSMg01no460_p18.g1 CHROMAT_FILE:
MSMg01no460_p18.g1 PHD_FILE: MSMg01no460_p18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:24 2005
(460 letters)
>mm_chr8_23443114_23443973
Length = 860
Score = 859 bits (444), Expect = 0.0
Identities = 456/460 (99%)
Strand = Plus / Plus
Query: 1 tctctttactttgaactacagaagcatggtcagcttgaacagctatgttactaaacaact 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctttgctttgaactacagaagcatggtcagcttgaacagctatgttactaaacaact 260
Query: 61 ctaccccagcacgggtgataaccctcaaagtcggcaagctaagcctcaaccccagccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaccccagcacgggtgataaccctcaaagtcggcaagctaagcctcaaccccagccaac 320
Query: 121 cttcatatcccatcaaacataatgtgtttgggacagaattacatgcagctgacagggtgg 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcatatcccatgaaacataatgtgtttgggacagaattacatgcagctgacagggtgg 380
Query: 181 ggaccgtggacctggaagtgggttagaatctcaggagaatatagaataacacacataatt 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 ggaccgtggacctggaagtgggttagaatctcaggagaatatagaatagcacacataatt 440
Query: 241 ctccctgggactagagtagggctgaagatagagtctgtcatgaataacttgtgcgttgaa 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctccatgggactagagtagggctgaagatagagtctgtcatgaataacttgtgcgttgaa 500
Query: 301 gccttaccatctccccgctccaggagacggcgctatttctctgacgtactgaacacccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccttaccatctccccgctccaggagacggcgctatttctctgacgtactgaacacccta 560
Query: 361 gacgctgtggtcatcggtgtgactgtggttgtggctgtcatttatgcactttatgacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacgctgtggtcatcggtgtgactgtggttgtggctgtcatttatgcactttatgacaaa 620
Query: 421 cactttctcagagatatcccaaggtatgaaacatttggct 460
||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cactttctcagagatatcccaaggtatgaaacatttggct 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
