Query= MSMg01no462_c18.b1 MSMg01no462_c18.b1 CHROMAT_FILE:
MSMg01no462_c18.b1 PHD_FILE: MSMg01no462_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:05 2005
(501 letters)
>mm_chr8_82131928_82132828
Length = 901
Score = 932 bits (482), Expect = 0.0
Identities = 494/498 (99%), Gaps = 2/498 (0%)
Strand = Plus / Minus
Query: 4 ggaattcattagatcttccatgtagcttggtgggtcagagaacagtgactttaggcagat 63
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 ggaattcattaga-cttgcatgtagcttggtgggtcagagaacagtgactttaggcagat 826
Query: 64 ggctggtctgtgtctcacccaggaaacccagctggtctgtcttccaggtagcttggttgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ggctggtctgtgtctcacccaggaaacccagctggtctgtcttccaggtagcttggttgg 766
Query: 124 tctgagcctgtgtaagcagcgtggctgagctacctcttccaggaagtcccgatggtcaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 tctgagcctgtgtaagcagcgtggctgagctacctcttccaggaagtcccgatggtcaaa 706
Query: 184 gagtgtctttcaacaatttttcctgcctaagtaactttggggaagaaagagttcatgtgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gagtgtctttcaacaatttttcctgcctaagtaactttggggaagaaagagttcatgtgg 646
Query: 244 tcagtttcaggattttcctgatgccttttttttttttctgttttctttgtttgtttgttt 303
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 645 tcagtttcaggattttcctgatgcc-tttttttttttctgttttctttgtttgtttgttt 587
Query: 304 tgaaatttccctgagtcttactgagtttcctttaggatgtaatgtttttcctccctttgg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tgaaatttccctgagtcttactgagtttcctttaggatgtaatgtttttcctccctttgg 527
Query: 364 aatgctcagcaagacaggaaagtttatcttgtaggacttcactacatgacattgcgctcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aatgctcagcaagacaggaaagtttatcttgtaggacttcactacatgacattgcgctcc 467
Query: 424 agcctgcattcagagctcagagaacaaacatgggagtctggtctctccttccatcacaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 466 agcctgcattcagagctcagagaacaaacatgggagtctggtctctccttccatcacgag 407
Query: 484 gatcctgggactcgaaca 501
||||||||||||||||||
Sbjct: 406 gatcctgggactcgaaca 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_c18.g1 MSMg01no462_c18.g1 CHROMAT_FILE:
MSMg01no462_c18.g1 PHD_FILE: MSMg01no462_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:05 2005
(419 letters)
>mm_chr8_81949539_81950357
Length = 819
Score = 702 bits (363), Expect = 0.0
Identities = 405/419 (96%)
Strand = Plus / Plus
Query: 1 tgtgttttgaacttcacctaagttgttgctgttggtgatcattactacggaattagttat 60
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 201 tgtgttttgaacttcacctaagttgttgctgttggtgatccttactatggaattagttat 260
Query: 61 cttgaatgaagatatattgtcttcacttaattttttttaataattggttttgagatgaat 120
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||
Sbjct: 261 cttgaatgaagatatattgtcttcatttatttttttttaataattggttttgagatggat 320
Query: 121 tcatgacatctttagttaagtcattcctttaatcttttgctatgagctcttagcccacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatgacatctttagttaagtcattcctttaatcttttgctatgagctcttagcccacaa 380
Query: 181 ggtcagagttcccaggcatctgggtcagggcaatgggctgggtagattcaggaaatccta 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 ggtcagagttcccaggcatctgggtcagggcaatgggctgggtggattcaggaaatccta 440
Query: 241 tgatttctgaacaaaggggagttgttcccttactagaaccctgtgggtagctggagagtc 300
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgagcgctgaacaaaggggagttgttcccttactagaaccctgtgggtagctggagagtc 500
Query: 301 ctgaactgggggatggcaccaggtgaatgggggcaaagatgaagtaaacagatctgttac 360
|||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 501 ctgagctgggggatggcaccaggtgaatgggagcaaagatgaggtaaacagatctgttac 560
Query: 361 caaaagaaagtcttaaggtgtggcagtgagttaggcacttggagagggtcccagggaag 419
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaaagaaagtctcaaggtgtggcagtgagttaggcacttggagagggtcccagggaag 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
