Query= MSMg01no468_n04.b1 MSMg01no468_n04.b1 CHROMAT_FILE:
MSMg01no468_n04.b1 PHD_FILE: MSMg01no468_n04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:11 2005
(453 letters)
>mm_chr8_14227800_14228652
Length = 853
Score = 841 bits (435), Expect = 0.0
Identities = 447/451 (99%), Gaps = 2/451 (0%)
Strand = Plus / Minus
Query: 4 gaattcctcagcggtt-gcagctatttctatagtaacccttgagtttctgtcagtaaact 62
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gaattcctcagc-gttagcagctatttctatagtaacccttgagtttctgtcagtaaact 595
Query: 63 tggtatattcaatcctagaaagcctaccagtgagagatgagacacagagcctctgcctcg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tggtatattcaatcctagaaagcctaccagtgagagatgagacacagagcctctgcctcg 535
Query: 123 gtggatagcatggcgttcacttcctcttctgaacaggctcagaggtccctgctgcccata 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gtggatagcatggcgttcacttcctcttctgaacaggctcagaggtccctgctgcccata 475
Query: 183 gctccggagtcttcccttccctgctgcagacacgcatgagctggccagtttccaaagtta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gctccggagtcttcccttccctgctgcagacacgcatgagctggccagtttccaaagtta 415
Query: 243 tatgtcattaggactgtgtcacacatctctgcggctcatatggcatttttaaatgtttta 302
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 414 tatgtcattaggactgtgtcacacatctctgcagctcaaatggcatttttaaatgtttta 355
Query: 303 atgagcagagtcataatcacaataagttcccgaaaccatgtaataattatttacacatac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 atgagcagagtcataatcacaataagttcccgaaaccatgtaataattatttacacatac 295
Query: 363 atcttgggcaagctatggagccattgagctacagagctatgaatacactgcatactccaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 atcttgggcaagctatggagccattgagctacagagctatgaatacactgcatactccaa 235
Query: 423 cacaggaggctggggcgggggtgggggggat 453
|||||||||||||||||||||||||||||||
Sbjct: 234 cacaggaggctggggcgggggtgggggggat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_n04.g1 MSMg01no468_n04.g1 CHROMAT_FILE:
MSMg01no468_n04.g1 PHD_FILE: MSMg01no468_n04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:11 2005
(384 letters)
>mm_chr8_14048528_14049311
Length = 784
Score = 625 bits (323), Expect = 0.0
Identities = 365/379 (96%)
Strand = Plus / Plus
Query: 1 cttcctgaaaaagcagatacactgaagtaagttccaaattttctaggttaatatttatct 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcctgaaaaagcagaaacactgaagtaagttccaaattttctaggttaatatttatct 260
Query: 61 aaatacttctctgtgtgtgaagttcaagctagacaaaattccagcacatggaaggacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 aaatacttctctgtgtgtgaagttcaagctagacaaaattccagcacatggaaagacaca 320
Query: 121 tgggcatggacacacagacacatgcactctcacccatacttgagaaactgtttgcaatca 180
|||||| |||||||||||||||||| ||||||||||||| ||| |||||||||||||||
Sbjct: 321 tgggcacagacacacagacacatgcattctcacccatactcgaggaactgtttgcaatca 380
Query: 181 gcggctgctgggggaatggaaatcagttttcttcaacggagtggcactgggtaagtcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcggctgctgggggaatggaaatcagttttcttcaacggagtggcactgggtaagtcagt 440
Query: 241 cccaccccataatagaccgtgctcagggatacttgggtaactcaagagtctccaagactt 300
||||||||| | |||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 441 cccaccccaggacagaccgtgctcagggatactcggataattcaagagtctccaagactt 500
Query: 301 ttgttcttgtttcatcttgtttgggggttttctctcttgttttatgtttgcagaatatgg 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 ttgttcttgtttcatcttgtttgggggttttctctcttgttttgtgtttgcagaatatgg 560
Query: 361 agatgggttgatggggaga 379
|||||||||||||||||||
Sbjct: 561 agatgggttgatggggaga 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
