Query= MSMg01no469_f11.b1 MSMg01no469_f11.b1 CHROMAT_FILE:
MSMg01no469_f11.b1 PHD_FILE: MSMg01no469_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:54 2005
(154 letters)
>mm_chr8_90534662_90535215
Length = 554
Score = 292 bits (151), Expect = 6e-84
Identities = 151/151 (100%)
Strand = Plus / Minus
Query: 1 acacagaaaaatcttgtctcaaaaaaacaagcaagcaagcaaacaaacaaataccaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 acacagaaaaatcttgtctcaaaaaaacaagcaagcaagcaaacaaacaaataccaccac 343
Query: 61 taccctcaaagaattaaatgtatctggtgtctggtttgagtggctggttctagaggtagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 taccctcaaagaattaaatgtatctggtgtctggtttgagtggctggttctagaggtagt 283
Query: 121 attttggagagtgattggtttggtttggttt 151
|||||||||||||||||||||||||||||||
Sbjct: 282 attttggagagtgattggtttggtttggttt 252
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 154
Length of database: 554
Length adjustment: 8
Effective length of query: 146
Effective length of database: 546
Effective search space: 79716
Effective search space used: 79716
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no469_f11.g1 MSMg01no469_f11.g1 CHROMAT_FILE:
MSMg01no469_f11.g1 PHD_FILE: MSMg01no469_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:54 2005
(510 letters)
>mm_chr8_90355838_90356748
Length = 911
Score = 919 bits (475), Expect = 0.0
Identities = 502/511 (98%), Gaps = 1/511 (0%)
Strand = Plus / Plus
Query: 1 tccacaaacaggtcaccaaggggatatgaaatagactgtgttgtctcagactgtgtccca 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccacaaacaggtcaccaagggtatatgaaatagactgtgttgtctcagactgtgtccca 260
Query: 61 ggttcctctgtcacctaacttttggagaaagaaccgatgtcacccacccaagagatgacc 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttcctctgtcacctagcttttggagaaagaaccgatgtcacccacccaagagatgacc 320
Query: 121 aggagcaagtgagataactccaagaaagagggaaagccagaggaatggtaagatcgtcct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 aggagcaagtgagataactccaagaaagagggaaagccagaggaatggtaagatcgccct 380
Query: 181 cagctaagaagcctccttccttgtatctaattaccaggcaagcagatcctgagcaccagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagctaagaagcctccttccttgtatctaattaccaggcaagcagatcctgagcaccagg 440
Query: 241 tatatc-atctagaaggttgtacccagtcgcttccttccagttattcgagggtctgtgct 299
|| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagaaccatctagaaggttgtacccagtcgcttccttccagttattcgagggtctgtgct 500
Query: 300 ttgcacgcctgactggcacacaggtttattgtgcaccaattttaatatcaaaagactcta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgcacgcctgactggcacacaggtttattgtgcaccaattttaatatcaaaagactcta 560
Query: 360 gggaaatttttttggagtgttttatttgcttaagatcctggagctgacactgggactccc 419
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 gggaaatttttttggagtgttttatttgcttaagatcctggagctgacacagggactccc 620
Query: 420 ctgagcacaatgggatgcaacaactcagggagcagcaaggcagggccaagcgtggagcga 479
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 ctgagcacaatgggatgcaacaactcagggagcagcaaggcaggaccaagcgtggagcga 680
Query: 480 gtgcgtgggccggcgtggtacggtcacgcgt 510
|||||||||||||||||| ||||||||||||
Sbjct: 681 gtgcgtgggccggcgtggcacggtcacgcgt 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 911
Length adjustment: 10
Effective length of query: 500
Effective length of database: 901
Effective search space: 450500
Effective search space used: 450500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
