Query= MSMg01no471_b21.b1 MSMg01no471_b21.b1 CHROMAT_FILE:
MSMg01no471_b21.b1 PHD_FILE: MSMg01no471_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:15 2005
(651 letters)
>mm_chr8_14299742_14300790
Length = 1049
Score = 1094 bits (566), Expect = 0.0
Identities = 632/658 (96%), Gaps = 9/658 (1%)
Strand = Plus / Plus
Query: 1 aaagttacagagagatggtttctcatcattatgtgaaattacaagtgggcagggcctgag 60
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagttaca-a-agatggtttctcatcattatgtgaaattacaagtgggcagggcctgag 258
Query: 61 gagtagaattgaggtaaagcttttcttctggacccagacaagtggaacgttactaagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gagtagaattgaggtaaagcttttcttctggacccagacaagtggaacgttactaagaca 318
Query: 121 ttctgtctagtctcagaattatctgtttttcatcactgacatttggagactcgtggacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttctgtctagtctcagaattatctgtttttcatcactgacatttggagactcgtggacct 378
Query: 181 cagtgcctttaggagggcatgtctctgaagctgagatatccagcatttctgatcctgtcc 240
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 379 cagtgcctttaggagagcatgtctctgaagctgagatatccagcaattctgatcctgtcc 438
Query: 241 tggggtcttttagggctaatggggcttgcctgcctcatgtcctttcccagatgcttcaaa 300
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 439 tggggtcttagagggctaatggggcttgcctgcctcatgtcctttcccagacacttcaaa 498
Query: 301 actctggttaatgggcacagcagtgatgccatgaaactgggcagggcagagccactctgg 360
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gctctggttaatgggcatagcagtgatgccatgaaactgggcagggcagagccactctgg 558
Query: 361 agttccctctggttccagaaagtgaccacagttactcccttaggaccaccatagcatctg 420
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agttccctttggttccagaaagtgaccacagttactcccttaggaccaccatagcatcta 618
Query: 421 tggtgggaccatttgacatcaccaatgtagagcaaagaacatctgaccacggctgcaagt 480
|||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 619 tggtgggaccgtttgacatcaccaatggagagcaaagaacatctgaccacagctgcaagt 678
Query: 481 caccccatctctcacaagcttgagacaaaggattctagatccaagtgccaacagttttca 540
||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 679 caccctatctctcacaagcttgagacaaaggattctagatctaagtgccgacagttttca 738
Query: 541 taccagtcctagcaaatatctgtgggggtacacaaggccgcagcac-------ctcaccc 593
||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 739 taccagtcctagcaagtatctgtgggggtacacaaggccgcagcacacagcacctcaccc 798
Query: 594 tctaggattcaggctttctttacctttacagctgctttggaaaggcgagcgactgaga 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tctaggattcaggctttctttacctttacagctgctttggaaaggcgagcgactgaga 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1049
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1039
Effective search space: 665999
Effective search space used: 665999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_b21.g1 MSMg01no471_b21.g1 CHROMAT_FILE:
MSMg01no471_b21.g1 PHD_FILE: MSMg01no471_b21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:15 2005
(665 letters)
>mm_chr8_14489865_14490929
Length = 1065
Score = 1239 bits (641), Expect = 0.0
Identities = 659/665 (99%)
Strand = Plus / Minus
Query: 1 atgaaaataatctctcaggcttttccagaatcacggaaagacgctgaggccttgatctga 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 865 atgaaaataatctctcaggcttttccagaatcacggaaagatgctgaggccttgatctga 806
Query: 61 agaagcacagcctgtgccaaatgggatgtataaaagctgttccggatcgagacgtgaatg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 805 agaagcacagcctgtgccaaatgggatgtataaaagctgttccggatcaagacgtgaatg 746
Query: 121 acaatggcatcggggagaagcctgaaagaaaggcaagttatctaagccagacaacggtga 180
|||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 745 acaatggcattggggagaagcctgaaagaaaggaaagttatctaagccagacaatggtga 686
Query: 181 ggcttaataaagactcttatagcagtcatgggaacccaaacacaatgaccacgaagaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggcttaataaagactcttatagcagtcatgggaacccaaacacaatgaccacgaagaaaa 626
Query: 241 atgagcatcaactcaaagttttacatccagacaaagggaggctctaaatgaagataaaat 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atgagcattaactcaaagttttacatccagacaaagggaggctctaaatgaagataaaat 566
Query: 301 taaattatttgtatagaccaagcagagtttctgtttctaagagacttttctggggcaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taaattatttgtatagaccaagcagagtttctgtttctaagagacttttctggggcaagt 506
Query: 361 tgtaaagaatggacttcaggagggaggacgccctagaggacagaccaaaatcaagaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtaaagaatggacttcaggagggaggacgccctagaggacagaccaaaatcaagaaaaa 446
Query: 421 agttgaccaatataactggaaggcaagcaaaggaaggtgaatcacaagttagcataagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agttgaccaatataactggaaggcaagcaaaggaaggtgaatcacaagttagcataagat 386
Query: 481 aataatcgtgtcaagttgatggatggggggtacaaaaattgaaccaagctatatggccag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aataatcgtgtcaagttgatggatggggggtacaaaaattgaaccaagctatatggccag 326
Query: 541 aaggaaaagttataagtaaaatttcctaagatcactctgttacttacaaagagagaagag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaggaaaagttataagtaaaatttcctaagatcactctgttacttacaaagagagaagag 266
Query: 601 aattaaaagtagattatcttccaggttttaaattatccaagtgagtatcctggacttttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aattaaaagtagattatcttccaggttttaaattatccaagtgagtatcctggacttttt 206
Query: 661 ctgtg 665
|||||
Sbjct: 205 ctgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
