Query= MSMg01no472_g05.b1 MSMg01no472_g05.b1 CHROMAT_FILE:
MSMg01no472_g05.b1 PHD_FILE: MSMg01no472_g05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:00 2005
(551 letters)
>mm_chr8_46380489_46381439
Length = 951
Score = 592 bits (306), Expect = e-173
Identities = 318/322 (98%)
Strand = Plus / Minus
Query: 230 tcagtgtaccttgtcttattgtgatttgtagctcctgataattcgttgtattataaaata 289
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 951 tcagtgtaccttgtcttattgtgatttgtagctcctgataattcgttgtaatataaaata 892
Query: 290 gtctaatgttcgaccagagattacattcagattcaacacctctcttgtgtgcatctgttt 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 gtctaatgttcgaccagagattacattcagattcaacacctctcttgtgtgcatctgttt 832
Query: 350 gtcaatttaatcctaagctttgcccacctactctagagacccgttctacacagacacagg 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 gtcaatttaatcctaagctttgcccacctactctagagacccgttctacacagacacagg 772
Query: 410 gacccagagggtctgcagcaacctcttgcatggttatgtgtgcacacacagaagaagtat 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 gacccagagggtctgcagcaacctcttgcatggttatgtgtgcacacacagaagaagtat 712
Query: 470 aggtgtgatggtcaaaggacacttttaggtggttgccttactccctccactgtgcaggtt 529
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 711 aggtgtggtggtcaaaggacacttttagggggttgccttactccctccactgtgcaggtt 652
Query: 530 ctggggatagaactccggtcat 551
|||||||||||||||| |||||
Sbjct: 651 ctggggatagaactccagtcat 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_g05.g1 MSMg01no472_g05.g1 CHROMAT_FILE:
MSMg01no472_g05.g1 PHD_FILE: MSMg01no472_g05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:01 2005
(433 letters)
>mm_chr8_46202135_46202967
Length = 833
Score = 652 bits (337), Expect = 0.0
Identities = 416/459 (90%), Gaps = 30/459 (6%)
Strand = Plus / Plus
Query: 1 tcatggttggagttaccaggtagagaacaaataaacctgctaacttccccagcccttagt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 171 tcatggttggagttaccaggtagagaacaaataaacctgctagcttccccagctcttagt 230
Query: 61 tgacttaaaaatagctaa-ttttttttgggggggg--gtgtcatgcaagttaagactcat 117
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 231 tgacttaaaaatagctaatttttttttgggggggggagtgtcatgcaagttaagactcat 290
Query: 118 caattttccctaaccttgtgcagctgccacctctaacataccttgggtttatggtaacag 177
||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||||||||
Sbjct: 291 caattttccctaaccttgtgcagatgccacctctaatgtacctcgggcttatggtaacag 350
Query: 178 tcacctatgttatgtggctggccacttttgctgataatggtgacttttcacttggcttgt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 351 tcacctatgttatgtggctggccacttttgctgataatggtgacttttcacttggctcgt 410
Query: 238 agatgcct--tg-----ttcagcaaggcataagcagcagtcactgataaatgatttaaca 290
||||| || || |||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 411 agatgtctgatgactggttcagcaaggcagaagcagcagtcactgataaattatttaaca 470
Query: 291 caagacaaagactcctgtcatggctagtgtgtgtgtgta--------------------a 330
|||||||||||||||||||||||||||||||||||||| |
Sbjct: 471 caagacaaagactcctgtcatggctagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtta 530
Query: 331 tttctccatttatataaaaatactttgttttgtgttgaaaatattctaacccctgacact 390
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 531 tttctccatttatataaaaatactttgttttgtgttgaaaatattttaacccctgacact 590
Query: 391 aaggattttttttttctggagtagaaagaactacccaag 429
|||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aaggattttttttttctggagtagaaagaactacccaag 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
