Query= MSMg01no472_o23.b1 MSMg01no472_o23.b1 CHROMAT_FILE:
MSMg01no472_o23.b1 PHD_FILE: MSMg01no472_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:45 2005
(243 letters)
>mm_chr8_113691141_113691780
Length = 640
Score = 424 bits (219), Expect = e-123
Identities = 233/239 (97%), Gaps = 3/239 (1%)
Strand = Plus / Minus
Query: 5 gaattctccgtttccccgcttttgtagttagtctttctattaggtttagtttctgtttga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaattctccgtttccccgcttttgtagttagtctttctattaggtttagtttctgtttga 381
Query: 65 tggaaatgagatcgggcaggatcttgctctctaacacggtgggcacttgtcagcacagat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggaaatgagatcgggcaggatcttgctctctaacacggtgggcacttgtcagcacagat 321
Query: 125 tcttcttctgggcgccgccgttccttcagatacagctttgctttcccttcctgcggaatc 184
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcttcttctgggtgcca---ttccttcagatacagctttgctttcccttcctgcggaatc 264
Query: 185 ctgtggacaggtggtgcacccaggtctgtccctagtgaccttttccatctccttcttaa 243
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctgtggacaggtgttgcacccaggtctgtccctagtgaccttttccatctccttcttaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 640
Length adjustment: 9
Effective length of query: 234
Effective length of database: 631
Effective search space: 147654
Effective search space used: 147654
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no472_o23.g1 MSMg01no472_o23.g1 CHROMAT_FILE:
MSMg01no472_o23.g1 PHD_FILE: MSMg01no472_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:45 2005
(364 letters)
>mm_chr8_113494378_113495141
Length = 764
Score = 665 bits (344), Expect = 0.0
Identities = 359/364 (98%)
Strand = Plus / Plus
Query: 1 accccctgttgggttgatctccctagggcctcactagtgtcaggaacgggtaggaagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accccctgttgggttgatctccctagggcctcactagtgtcaggaacgggtaggaagctt 260
Query: 61 caccgggtcacatgcaaggtgcttctctcacatgtgccctcactcctgtcccccaccacc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 261 caccgggtcacatgcaaggtgcttctctcacatgtgccctcactcctgtctcctaccacc 320
Query: 121 ttctcagcgtctgtccttaggtcctgggcctcctctccagctcacctgttgattcggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctcagcgtctgtccttaggtcctgggcctcctctccagctcacctgttgattcggaga 380
Query: 181 caaagtgagaccacccggactcggctgcttttgctctcccacacgtgacccgtgtcttta 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaagtgagaccaccctgactcggctgcttttgctctcccacacgtgacccgtgtcttta 440
Query: 241 gccctaatgcgcgagagagcaacacggttggacagttggctggaaaggagatccctgagc 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccctaaggcgcgagagagcaacacggttggacagttggctggaaaggagatccctgagc 500
Query: 301 atgtatcgttttctttcattgtcaccccaaagaggagcaggcagcctcttgcttgggggt 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtaccgttttctttcattgtcaccccaaagaggagcaggcagcctcttgcttgggggt 560
Query: 361 agga 364
||||
Sbjct: 561 agga 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
