Query= MSMg01no475_h13.b1 MSMg01no475_h13.b1 CHROMAT_FILE:
MSMg01no475_h13.b1 PHD_FILE: MSMg01no475_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:15 2005
(569 letters)
>mm_chr8_75589613_75590579
Length = 967
Score = 1065 bits (551), Expect = 0.0
Identities = 564/569 (99%), Gaps = 2/569 (0%)
Strand = Plus / Plus
Query: 1 ccagagagcaaaaagcagattatgccttttggtaaaaccagttatatgaagcacattgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagagagcaaaaagcagattatgccttttggtaaaaccagttatatgaagcacattgtt 260
Query: 61 gctttcactaggtacatatgttatgtatcacattgtgatttctatgcatgcttcatagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctttcactaggtacatatgttatgtatcacattgtgatttctatgcatgcttcatagcc 320
Query: 121 cagctggctgccccaagaccagatttcctttgttttttaattgaagtgtaggaagtaatc 180
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 321 cagctggctgccccaagaccagatttcctttgttttctaattgaagtgtaggaagtaagc 380
Query: 181 caggcaagcccaaagacagtttcggataggagactcaggaaacactccgggattttcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggcaagcccaaagacagtttcggataggagactcaggaaacactccgggattttcagc 440
Query: 241 tgtttatttcttgtcaccagctctattctgaagccaaggtagtcagcattttcctagaca 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtttatttcatgtcaccagctctattctgaagccaaggtagtcagcattttcctagaca 500
Query: 301 atagggtcaccccaatgttttaagatccttatgtgtgggtgacatgaaactatttgacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atagggtcaccccaatgttttaagatccttatgtgtgggtgacatgaaactatttgacaa 560
Query: 361 agcttagagatgttctcagttgtcaaaatgtgtgtgtgtgtgtacattacaagggggtta 420
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 agcttagagatgttctcagttgtcaaaatgtgtgtgtgtgt--acattacaagggggtta 618
Query: 421 tggggcaagaccaggtctgggttctcagtaccctcagaaagaacatctttaaccatgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tggggcaagaccaggtctgggttctcagtaccctcagaaagaacatctttaaccatgaat 678
Query: 481 aattgccagacccaaactatcaatactgagataaggaaccttattcaaagggactgttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aattgccagacccaaactatcaatactgagataaggaaccttattcaaagggactgttga 738
Query: 541 aaacctatatacacagacacagacacaca 569
|||||||||||||||||||||||||||||
Sbjct: 739 aaacctatatacacagacacagacacaca 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 967
Length adjustment: 10
Effective length of query: 559
Effective length of database: 957
Effective search space: 534963
Effective search space used: 534963
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_h13.g1 MSMg01no475_h13.g1 CHROMAT_FILE:
MSMg01no475_h13.g1 PHD_FILE: MSMg01no475_h13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:15 2005
(439 letters)
>mm_chr8_75722372_75723209
Length = 838
Score = 799 bits (413), Expect = 0.0
Identities = 430/437 (98%), Gaps = 5/437 (1%)
Strand = Plus / Minus
Query: 5 gcagcaaactcataaacatgtacatacagacacacaagacacacacagaatcaccaactt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gcagcaaactcataaacatgtacatacagacacacaagacacacacagaatcaccaactt 579
Query: 65 tatccataaaacatcaagcaccaagtctttggcttgcctccactttatttttcacagttg 124
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tatccatagaacatcaagcaccaagtctttggcttgcctccactttatttttcacagttg 519
Query: 125 ccctgtaaggcccagacacattcttatttagcaaccagaaatggaaacagtaactgattc 184
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 518 ccctgtaaggcccagacacattcttatttagcaaccagaaatggaagcagtaactgattc 459
Query: 185 atgtttgagagctagagagtagggtgctaatatttaaacagggctgttgcatctatctta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 458 atgtttgagagctagagagtagggtgctaatatttaaacagggctgttgcatcta--tta 401
Query: 245 t--tctgtcttgggttctttgacttcctaaatgggttagattctaaacctcacctctctt 302
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tagtctgtcttgggttctttgacttcctaaatgggttagattctaaacctcacctctctt 341
Query: 303 tgatgtaagatctctcccacttgctttgttatccatagaggttgggacaattagctattt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgatgtaagatctctcccacttgctttgttatccatagaggttgggacaattagctattt 281
Query: 363 ccctgtatgtcaccttgaatggaaaatgtccttatccaaagttcttcaggagagctgtat 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ccctgtatgtcaccttgaatggaaaatgtccttatccaaagttcttcaggagagctgta- 222
Query: 423 tttttttttcaacttgc 439
|||||||||||||||||
Sbjct: 221 tttttttttcaacttgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 838
Length adjustment: 9
Effective length of query: 430
Effective length of database: 829
Effective search space: 356470
Effective search space used: 356470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|