Query= MSMg01no476_d19.b1 MSMg01no476_d19.b1 CHROMAT_FILE:
MSMg01no476_d19.b1 PHD_FILE: MSMg01no476_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:17 2005
(369 letters)
>mm_chr8_17749372_17750142
Length = 771
Score = 629 bits (325), Expect = 0.0
Identities = 359/371 (96%), Gaps = 2/371 (0%)
Strand = Plus / Minus
Query: 1 tttgatggaaaatgcatagaaagagatg--attttttgatattatagtttgaaattattt 58
||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 571 tttgatggaaaatacatagaaagagatgttttttttttatattatagtttgaaattattt 512
Query: 59 catatgcacactaaagctttcttgaatggagttctgctagattgccttggcagtacagat 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 catatgcacactaaagctttcttgaatggagttctgctagattgccttggcagtacagat 452
Query: 119 ttgcatctctttgatgttttaagagactaagccccacctttgtgttgaatgcagcaatga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ttgcatctctttgatgttttaagagactaagccccacctttgtgttgaatgcagcaatga 392
Query: 179 attggtttatgtcataatttataaatacctcagttattgtaattctataacatggaattg 238
||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 391 atttttttatgtcataatttataaatacctcagttcttgtaattctataacatggaactg 332
Query: 239 tcagctcttatatgcccgacaaatggaaagcgatatatttctgtttttctttgtgttaaa 298
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 331 tcagctcttatatacccgacaaatagaaagcgatatatttctgtttttctttgtgttaaa 272
Query: 299 gatgtgtgaatgtgattcccatgaaagagtcaattatttctagcaaagtccctccatgac 358
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 271 gatgtgtgaatgtgattcccatgaaagagtcaattatttccagcaaagtccctccatgac 212
Query: 359 tgtaaagaaat 369
|||||||||||
Sbjct: 211 tgtaaagaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 771
Length adjustment: 9
Effective length of query: 360
Effective length of database: 762
Effective search space: 274320
Effective search space used: 274320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_d19.g1 MSMg01no476_d19.g1 CHROMAT_FILE:
MSMg01no476_d19.g1 PHD_FILE: MSMg01no476_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:17 2005
(247 letters)
>mm_chr8_17572478_17573124
Length = 647
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 1 ctcagcaccagtgggaagctttaggcttccctgggtatcatttctgtgaggtcctctagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcagcaccagtgggaagctttaggcttccctgggtatcatttctgtgaggtcctctagc 260
Query: 61 cctccatgtaataaaggaaatgttgctatgctataatacacaatggtcaacttatcagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctccatgtaataaaggaaatgttgctatgctataatacacaatggtcaacttatcagat 320
Query: 121 ggcactcagaaagcaggtaccaaccagccctgtagcttagaggagtaagggggtctgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcactcagaaagcaggtaccaaccagccctgtagcttagaggagtaagggggtctgatt 380
Query: 181 tcagattaatatggcaaaaccagaaacatgcacaacttactaaaaacaaaagaactgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagattaatatggcaaaaccagaaacatgcacaacttactaaaaacaaaagaactgttc 440
Query: 241 atga 244
||||
Sbjct: 441 atga 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
