NATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAAACAGGATCCG
CGGAATTCTTACTCGCCGAGAAGAGATCACTAAGAATAAAGAAGCTAGCT
ACATATTAATTAAAAATGAGAAGATATTTTCTAGATATTGAATAGATTCC
GTGGCAAGTGGATATCTGAATTGATTCCTTCTTGTCAAGCTGACACGAGC
TAGAGTCACCCAGTAAGTAGAGAACCTCAGATGAAGAATTACCTCTGCCA
GAATGGCCTGTAGATATGTCAGTGGGTTATGTGCTTAACTGGTAATTGGT
GTAGGAAGGCCCATCCTGTTGTGGGTGCCACTGTGCTGTGCAAGTGCTCC
TGGATGTATAAAACAATGTAGTTGAGCAAGTCAGTAAGTAGATTCCCTCT
ATGGTGCCCCCCTCTGCTCTTGCTTGACTTGGCCTTTCTTCAATCTGTGA
TCAGGACAAAGAAGCCCAATAACCCCTTTCCTCCGCAAGTTTCTTTTGGT
CATGGTGTTTATCACAGCAACAGAAACCAAACCAAGACAGTTTCTTTTCT
TGTCCCCCTGACAGAATGCCTGGAAGAAAAGGAGGGAGGGGTGATTTACT
GTCCTAACGGTTTCCTAGACTGCCGGCCACACAGTCCTTGCTCCACTGAA
CATGGCTCTCTGGTGAGGCAGAGCAACATGTCAATGGAAACTGTTGTAGG
ATTTCTAACATCATGGGGAGGGAGAGGAGGAAGATACTAAGGACN

TTTCGATGATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTTTATC
ATGAATGGGTGTTGGATCTTGTCAAATGCTTTTTCCACATCTAAGGAGAT
GATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATACTGGATTACATTGA
TGGATTTCCATATATTGAACCAACTGTGCATCCCTGGGATGAAACCTACT
TGGTCAGGATGGATGATTGTTTTGATGTGTTCTTGGATTTGGTTAGTGAG
AACTTTATTAAGGATTTTTGCATCGATATTCATAAGGGAAATTGGTCTGA
AGTTCTCTATCTTTGTTGGGTCTTTTCTGGTTTAGGTATCAGAGTAATAG
TGGCTTCATAGATTGAGTTGGGTAGAGTACCTTCGGTTTCTATTTTGTAG
AATAGTTTGTGAAGAACTGGGATTAGATCTTCTTTGAAGGTCTTATAGAA
CTCTGGACTAAACCCATCTGGTCCTGGGCTTTATTTGGTTGGGAGACTAT
TAATGACTGCTTCTATTTCTTCAGGAGATATAGGACTGTTTAGATCATTA
ACCTGATCTTGATTTAACTTTGGTACCTGGTATCTGTATAGAAACTTGTC
CATTTCGTCTAGGTTTTCCAGGTTTGTTGAGTATAGCCTTTTGTAGAAAG
ATCTGATTGTGTTTTGGATTTCTTCANGATCTGGTGTTATGTCTC

Query= MSMg01no479_d11.b1 MSMg01no479_d11.b1 CHROMAT_FILE:
MSMg01no479_d11.b1 PHD_FILE: MSMg01no479_d11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:08 2005
         (670 letters)



>mm_chr8_45873048_45874117
          Length = 1070

 Score =  762 bits (394), Expect = 0.0
 Identities = 400/402 (99%), Gaps = 1/402 (0%)
 Strand = Plus / Minus

                                                                        
Query: 270  caagtgctcct-ggatgtataaaacaatgtagttgagcaagtcagtaagtagattccctc 328
            ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 caagtgctcctgggatatataaaacaatgtagttgagcaagtcagtaagtagattccctc 1011

                                                                        
Query: 329  tatggtgcccccctctgctcttgcttgacttggcctttcttcaatctgtgatcaggacaa 388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 tatggtgcccccctctgctcttgcttgacttggcctttcttcaatctgtgatcaggacaa 951

                                                                        
Query: 389  agaagcccaataacccctttcctccgcaagtttcttttggtcatggtgtttatcacagca 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950  agaagcccaataacccctttcctccgcaagtttcttttggtcatggtgtttatcacagca 891

                                                                        
Query: 449  acagaaaccaaaccaagacagtttcttttcttgtccccctgacagaatgcctggaagaaa 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890  acagaaaccaaaccaagacagtttcttttcttgtccccctgacagaatgcctggaagaaa 831

                                                                        
Query: 509  aggagggaggggtgatttactgtcctaacggtttcctagactgccggccacacagtcctt 568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830  aggagggaggggtgatttactgtcctaacggtttcctagactgccggccacacagtcctt 771

                                                                        
Query: 569  gctccactgaacatggctctctggtgaggcagagcaacatgtcaatggaaactgttgtag 628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770  gctccactgaacatggctctctggtgaggcagagcaacatgtcaatggaaactgttgtag 711

                                                      
Query: 629  gatttctaacatcatggggagggagaggaggaagatactaag 670
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710  gatttctaacatcatggggagggagaggaggaagatactaag 669


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space:   699600
Effective search space used:   699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)