Query= MSMg01no479_e11.b1 MSMg01no479_e11.b1 CHROMAT_FILE:
MSMg01no479_e11.b1 PHD_FILE: MSMg01no479_e11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:13 2005
(533 letters)
>mm_chr8_125828205_125829137
Length = 933
Score = 971 bits (502), Expect = 0.0
Identities = 526/534 (98%), Gaps = 2/534 (0%)
Strand = Plus / Minus
Query: 1 ctgcagagaggagaaatatggcagccactgttgaggctcctcgtgcagtctgcacttctc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 733 ctgcagagaggagaaatatggcagccactgttgaggctcctcgtgaagtctgcacttctc 674
Query: 61 tggtgttggagtggaggggctagacagagcggaagagctggcgcctgcctggcaatggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tggtgttggagtggaggggctagacagagcggaagagctggcgcctgcctggcaatggca 614
Query: 121 tactgggattttgaaaggagctgggactgttattccaggttttggcgaccctgtttccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 613 tactgggattttgaaaggagctgggactgttattccaggttttggcgaccctgggtccag 554
Query: 181 aggagtcagttggccgtttgcaggaagtcctggagatgcaggaggttaactggcaacatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aggagtcagttggccgtttgcaggaagtcctggagatgcaggaggttaactggcaacatg 494
Query: 241 ggctcnt-ctgtgtgtctaccctggtcgtctgctttcccgaggcacagcagctggttaaa 299
|||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 493 tgctc-tcctgtgtgtctaccctggtcgtctgctttcccgaggcacagcagttggttaaa 435
Query: 300 ggtatgtatgtgttcatgggagccctgtcacacttgtgacttgcatgcagatgtgagtct 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 434 ggtatgtatgtgttcatgggagccctgtcacacttgtgatttgcatgcagatgtgagtct 375
Query: 360 tgtcccacactgtagaggctgagcaggcacacgactgaagcctgtcactcactaagaact 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgtcccacactgtagaggctgagcaggcacacgactgaagcctgtcactcactaagaact 315
Query: 420 taatagaaccctgtctgcatgtgtgtcacactgtgtgagtgctccttctgtgtgactgag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 taatagaaccctgtctgcatgtgtgtcacactgtgtgagtgctccttctgtgtgactgag 255
Query: 480 gcagcttgtgtccagcatgaggtggctgttgccatgcgaggagagcctagctca 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gcagcttgtgtccagcatgaggtggctgttgccatgcgaggagagcctagctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_e11.g1 MSMg01no479_e11.g1 CHROMAT_FILE:
MSMg01no479_e11.g1 PHD_FILE: MSMg01no479_e11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:13 2005
(629 letters)
>mm_chr8_125608212_125609240
Length = 1029
Score = 1067 bits (552), Expect = 0.0
Identities = 612/640 (95%), Gaps = 15/640 (2%)
Strand = Plus / Plus
Query: 1 aaggggagcctcatcatggcttttgttgcatctaggcagcatcttcatgatagcactgag 60
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 194 aaggagagcctcatcatggcttttgttgcatctaggcagcatcttcatggtagcactgag 253
Query: 61 catattttgcacagctgtgccctggcaggatacatttcctcataactgtgagacacagcc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aatattttgcacagctgtgccctggcaggatacatttcctcataactgtgagacacagcc 313
Query: 121 tgggactcagctgttgtcataccctaccagcagagagtcctctaacctctgagactgcta 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 314 tgggactcagctgttgtcataccctaccagcaaagagtcctctaacctctgagactgcta 373
Query: 181 gcacccttaagtggggtcactatgggccaaggcctgggtgatgccaggcttgaagtttac 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 374 gcacccttaagtggggtcactatgggccaaggcctgggtgatgccagacttgaagcttac 433
Query: 241 tgtttta----tagcaacactgcccttgcta-------tgttcacatgtagccacagcta 289
|| | ||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 434 tg----acagatagcaacactggccttgctaagagccatgttcacatgtagccacagcta 489
Query: 290 atggacattcccccaccccagactaaggttaaacgtgagcacccgagtgagcctccactc 349
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 490 atggacattcccccaccccagactaaggttaaacgtgagcacccaagtgagcctccactc 549
Query: 350 ttgtgtggggactgctctttattggtgctatgtgttaataaatgttctgttcctccatgt 409
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ttgtgtggggacggctctttattggtgctatgtgttaataaatgttctgttcctccatgt 609
Query: 410 cgacattatcagggtatgaccagcttctctttactactgggattcattccccatgtctct 469
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cgacgttgtcagggtatgaccagcttctctttactactgggattcattccccatgtctct 669
Query: 470 gttgttgcatttcctaaccacccacctcttgggtctattctgcatccatccaccacacaa 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gttgttgcatttcctaaccacccacctcttgggtctattctgcatccatccaccacacaa 729
Query: 530 accttccggccggcctagatggcttaagagctttaggggagtcttctgcctccactccct 589
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 730 accttccggccggcctagatggcttaagagctttgggggattcttctgcctccactccct 789
Query: 590 gccttcccaggagcactgggattagagagcttgggctgtg 629
||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gccttcccaggagcactgggattagagagcttgggctgtg 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
