Query= MSMg01no480_d05.b1 MSMg01no480_d05.b1 CHROMAT_FILE:
MSMg01no480_d05.b1 PHD_FILE: MSMg01no480_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:26 2005
(244 letters)
>mm_chr1_100354613_100355256
Length = 644
Score = 418 bits (216), Expect = e-121
Identities = 237/244 (97%)
Strand = Plus / Minus
Query: 1 accccgtgcacaaaccaaaatcagataattttacatgtcccttggcatccagtaaaacgt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 444 accccgtgcacaaaccaaaatcagataattttacatgtcccttggcatctagtaaaaggt 385
Query: 61 tgtctggtttgatgtcccggtggatgaagcccagctggtgaattgcatctatcgccaaga 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtctggtttgatgtcccagtggatgaagcccagctggtgaattgcatctatcgccaaga 325
Query: 121 cagtctctaagatgtagaactgtgtctcctattctgttaaggtgtcctttttcatcagca 180
|||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 324 cagtctctgagatgtagaactgtgtctcttcttctgttaaggtgtccttcttcatcagca 265
Query: 181 atgtcatcatgtcacctccaggaagaaattccatgatgagatagagattccgtttgtcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atgtcatcatgtcacctccaggaagaaattccatgatgagatagagattccgtttgtcct 205
Query: 241 gaaa 244
||||
Sbjct: 204 gaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no480_d05.g1 MSMg01no480_d05.g1 CHROMAT_FILE:
MSMg01no480_d05.g1 PHD_FILE: MSMg01no480_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:26 2005
(243 letters)
>mm_chr8_4497320_4497962
Length = 643
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%)
Strand = Plus / Plus
Query: 1 tgaatcttggatagactaggtgggatggagctgtggttggagaagacactaatgtgtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaatcttggatagactaggtgggatggagctgtggttggagaagacactaatgtgtgtg 260
Query: 61 gctgacatgagatgaacattgttacattgaagccagcaatctgtttctggtatctgccct 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgacatgagacgaacattgttacattgaagccagcaatctgtttctggtatctgccct 320
Query: 121 ttgtcatgtctttggaccccaagctggtagaggagtgacacaaggcaggctttggagtaa 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 ttgtcatgtctttggaccccaagctggtagaggagtgacacagggcaggctttggagtaa 380
Query: 181 caaaatgggagctaactgggagacagggcaggacataggtgggaggcaaggaccaagggt 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 caaaatgggagctaactgggagacagggcagaacataggtgggaggcaaggaccaagggt 440
Query: 241 gct 243
|||
Sbjct: 441 gct 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
