AACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCTTTTAGTGGCCAGCCCTGGGTGGGGGTGAGGGACAGGGATGG
ACACAGGAGAGGGCATAAGAAAGATGTCGGGAGGTTGCCCACAGAGACAG
GCAGACACATGGAGCTGCCCTCTTGGTGGAGCCTAGGACTCCTGAAAGGG
CTCCCCTCAGAGGAATGCCAACCAGGTTAAGTGCTGTAGTGTGTGCGGCA
TGGAGGCTGCATGGATGGGCAGAGAGACTGCACAGACAAGCAGCAGGGGA
GTGCCAAGCCAGTGCTGTGAGCAAGTCAGAGGGCTGGCTAAGAGTGGACA
CGAAGACAGGGAGACCTGGGAGGCTGACAGGGATCACATCTGACCTCTGC
AGAGGAGAAACTAACCATACACTGTTAGAAGTCTCAATACTGTGAACCTC
CTACTCGGTCCAGGCTGGCCACCCCATCCTGTGCTGAGCACAGGGCCTGG
GCCAAACCAACACCCCGGGCCACACTACATACATCCTGCAAAGACAGCAG
ATGACAGCAAGAAAGCTCTGTTCTAAGAATCCCTGAAGAAGGCCAGCTGG
GGAAATAGAGCAGCGACCAGGCTGCTGCCCATTCAACCCACCACCATGTC
CACCTAGCAGAGGACTCGAGGGACAACAGACCCATCAGCCAGGGTGGGTC
TGATCCAAGACTGGTGAAGGCCAGTCACGACGCGATG

CTGGNGGCCCCNCTTTCAAATTAAGGGGACNNNNAANNTTTTCAAATTTT
GTTTTTAAAAAAAATTTTTAAAACTAAATTTTTTTACAGAGTTTGTTTTG
TTGGGGGGGTCGGGGGGGTGGGGGGTTGGAGAGTGGGGGGGGGGGGGTCT
TGTAAAAAAAACGNCAAAAAATTTTAATTTTTTTTTTTTAAATTAAATGN
TTTTTCGATTNNNATTTTGTTTTNNNNNAAGAAGAAGAGNGGTCTAGAAA
GGAANNTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT
TTNNNNNNNNNNNNAANAAAAAAAAAANNNANNNNNNNNNNNNAANNNNA
AAAAAATTTTATATTATATAATAAAAAAATAATAAATTATAAAAAATATT
AATTTTTTATAATTATAAAAAAAAATTTTTTTATTNNTTTTANNNNAAAA
NNTTTAAATATAAAAATTTTATTTTTTTTTTNNTNNNNNNNTANNNAAAA
ATAATTTAAATAAAATTTAAAAAAAAAAAAAAAAAAAAAANATTTTTTTT
ATTNTATAATATTTATTTTTTTTANNNNNNTNATAATAATANNTATAANN
NTTTTATTNNNTTTATAATTTTTANNANTTTNNNNNANANNNNNNANNNN
NANTAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAATTTAAANTT
TANAAATTTTTTNTTTAATATTTTTTTTTTTTTTTTTTT

Query= MSMg01no480_j01.b1 MSMg01no480_j01.b1 CHROMAT_FILE:
MSMg01no480_j01.b1 PHD_FILE: MSMg01no480_j01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:54 2005
         (604 letters)



>mm_chr8_90815342_90816345
          Length = 1004

 Score = 1116 bits (577), Expect = 0.0
 Identities = 595/601 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccttttagtggccagccctgggtgggggtgagggacagggatggacacaggaga 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ggaattccttttagtggccagccctgggtgggggtgagggacagggatggacacaggaga 745

                                                                       
Query: 64  gggcataagaaagatgtcgggaggttgcccacagagacaggcagacacatggagctgccc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gggcataagaaagatgtcgggaggttgcccacagagacaggcagacacatggagctgccc 685

                                                                       
Query: 124 tcttggtggagcctaggactcctgaaagggctcccctcagaggaatgccaaccaggttaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcttggtggagcctaggactcctgaaagggctcccctcagaggaatgccaaccaggttaa 625

                                                                       
Query: 184 gtgctgtagtgtgtgcggcatggaggctgcatggatgggcagagagactgcacagacaag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtgctgtagtgtgtgcggcatggaggctgcatggatgggcagagagactgcacagacaag 565

                                                                       
Query: 244 cagcaggggagtgccaagccagtgctgtgagcaagtcagagggctggctaagagtggaca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cagcaggggagtgccaagccagtgctgtgagcaagtcagagggctggctaagagtggaca 505

                                                                       
Query: 304 cgaagacagggagacctgggaggctgacagggatcacatctgacctctgcagaggagaaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cgaagacagggagacctgggaggctgacagggatcacatctgacctctgcagaggagaaa 445

                                                                       
Query: 364 ctaaccatacactgttagaagtctcaatactgtgaacctcctactcggtccaggctggcc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctaaccatacactgttagaagtctcaatactgtgaacctcctactcggtccaggctggcc 385

                                                                       
Query: 424 accccatcctgtgctgagcacagggcctgggccaaaccaacaccccgggccacactacat 483
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 accccatcctgtgctgagcacagggcctgggccaaaccaacacccggggccacactacat 325

                                                                       
Query: 484 acatcctgcaaagacagcagatgacagcaagaaagctctgttctaagaatccctgaagaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 324 acatcctgcaaagacagcagatgacagcaagaaagctctgttctaagtatccctgaagaa 265

                                                                       
Query: 544 ggccagctggggaaatagagcagcgaccaggctgctgcccattcaacccaccaccatgtc 603
           |||||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 264 ggccagctagggaaatagaacagtgaccaggctgctgcccattcaacccaccagcatgtc 205

            
Query: 604 c 604
           |
Sbjct: 204 c 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space:   590436
Effective search space used:   590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)