Query= MSMg01no483_a24.b1 MSMg01no483_a24.b1 CHROMAT_FILE:
MSMg01no483_a24.b1 PHD_FILE: MSMg01no483_a24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:07 2005
(535 letters)
>mm_chr8_121792797_121793731
Length = 935
Score = 988 bits (511), Expect = 0.0
Identities = 526/531 (99%)
Strand = Plus / Plus
Query: 5 gaattcatgtaataatcacaagccctcttcctccacgtcgcttggagagggttctggtaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgtaataatcacaagccctcttcctccacgtcgcttggagagggttctggtaa 264
Query: 65 ccactgggaaatctctttttcccatcagaggttaacagtccctaactctttttttaagat 124
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccactgtgaaatctctttttcccatcagaggttaacagtccctaactctttttttaagat 324
Query: 125 ttattttatttcaatttgtgtctattggggggactggtgaatacaggtcaccaaagagtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttattttatttcaatttgtgtctattggggggactggtgaatacaggtcaccaaagagtc 384
Query: 185 ctgaagaggacaccagatctgctggagttacaggcagtcgtgaacccccctatgtgcgtg 244
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 385 ctgaagaggacaccggatctgctggagttacaggcggtcgtgaacccccctatgtgagtg 444
Query: 245 ctaggaaccaaactcagttcctctgcaggagcagtctgcactcttaactgctgagccacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctaggaaccaaactcagttcctctgcaggagcagtctgcactcttaactgctgagccacc 504
Query: 305 cctccagccccaggagtccccagctctcagccagagtctgagtgtcacttgctgacagct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cctccagccccaggagtccccagctctcagccagagtctgagtgtcacttgctgacagct 564
Query: 365 cttcttgggagtcagcaccatccaccgcatcttttctgaccttgtctctcatcctggcaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttcttgggagtcagcaccatccaccgcatcttttctgaccttgtctctcatcctggcaa 624
Query: 425 gtggtgccagggtttgccatggcaatcacgtctcatgttcagaagtttatgcttgctctg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtggtgccagggtttgccatggcaatcacgtctcatgttcagaagtttatgcttgctctg 684
Query: 485 gtagggaggtgggatttgaaccccagagcctgtgactcttcacccctagat 535
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 685 gtagggaggtgggatttgaaccccagagcctgtgactcttcgcccctagat 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_a24.g1 MSMg01no483_a24.g1 CHROMAT_FILE:
MSMg01no483_a24.g1 PHD_FILE: MSMg01no483_a24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:07 2005
(443 letters)
>mm_chr8_121976125_121976967
Length = 843
Score = 799 bits (413), Expect = 0.0
Identities = 424/431 (98%), Gaps = 6/431 (1%)
Strand = Plus / Minus
Query: 1 aggagcatcagataaaggacagtgcacactcatgctggctttggaggccaggtaccctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aggagcatcagataaaggacagtgcacactcatgctggctttggaggccaggtaccctgt 499
Query: 61 gagactgctacggggtccaagtcatgagtgaattgtagaaaacaactcaattggcttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gagactgctacggggtccaagtcatgagtgaattgtagaaaacaactcaattggcttcaa 439
Query: 121 agccagaagtgaggttcaggatagagttgggattcatatgcattacagggggtggtttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agccagaagtgaggttcaggatagagttgggattcatatgcattacagggggtggtttgg 379
Query: 181 gatggtggttcacaggaacaggatcttagaatgtagatcctggggtagttctgggattag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gatggtggttcacaggaacaggatcttagaatgtagatcctggggtagttctgggattag 319
Query: 241 aacagaacggagagagagcaggcagggtcatggccaagttccatcagtcctgtgtatact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aacagaacggagagagagcaggcagggtcatggccaagttccatcagtcctgtgtatact 259
Query: 301 acagcaggcccagggtctcttaccccttggtagcacataggacaaactctgtggcagtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 acagcaggcccagggtctcttaccccttggtagcacataggacaaactctgtggcagtca 199
Query: 361 cacactcacacacacacacacacacacagagagagagagagagagagagagagagagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ------cacacacacacacacacacacagagagagagagagagagagagagagagagaga 145
Query: 421 gagagagagag 431
||||| |||||
Sbjct: 144 gagagcgagag 134
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 77
Number of extensions: 24
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
