Query= MSMg01no483_c02.b1 MSMg01no483_c02.b1 CHROMAT_FILE:
MSMg01no483_c02.b1 PHD_FILE: MSMg01no483_c02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:13 2005
(694 letters)
>mm_chr8_17694493_17695584
Length = 1092
Score = 1265 bits (654), Expect = 0.0
Identities = 682/692 (98%), Gaps = 4/692 (0%)
Strand = Plus / Plus
Query: 4 ggaattccaagccctgagtgggaagcttccacccccaggcagctctcatggccagctctg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaagccctgagtgggaagcttccacccccaggcagctctcatggccagctctg 263
Query: 64 atgataggagggcagagggcctcaatctaggctttcctctcaagattgatatttcaaagg 123
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 264 atgataggagggcagagggcctcaatctaggctttcctttcaagattgatatttcaaagg 323
Query: 124 tggagaacaatgaaatgattcgtgtttgtgatctgaagatgcacaaggaggggagtaagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 324 tggagaacaatgaaatgattcgtgtttgtgatctgaagatgcacaaggaggggagtaggg 383
Query: 184 gagaaattaatagaagtcagacatgtgaatataaagctccatccagaagtgaaagaaagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagaaattaatagaagtcagacatgtgaatataaagctccatccagaagtgaaagaaagc 443
Query: 244 atcaacaggacaccttctgcaagatgtaggattcatcagacgaaggatatttaagatcag 303
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 444 atcaacaggacaccttctgcaagatgtaggattcatcagacgaaggaaatttaagatcag 503
Query: 304 agtctagtcaggccagaaattactgaatacatatcctcagttgctacaaaaccttctcaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agtctagtcaggccagaaattactgaatacatatcctcagttgctacaaaaccttctcaa 563
Query: 364 tcacagcatcctctttatgaattctgactcatttgatgtatgctttatacactttaatta 423
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 564 tcacagcatcctctttatgaattctgactcatttgatgtgtgctttatacactttaatta 623
Query: 424 cagggaaatatcaagcacaaagactgtacataagcaaagtcaccagacatgatccattga 483
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 624 cagggaaatatcaagcacaaagactgtacataagcaaagtcaccaggcatgatccattga 683
Query: 484 taaacccacccagagagtgatacaaacagagcaaatgtcagggatgttgcctacgtcagt 543
||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 684 taaacccacccagag--tgatacaaacagagcaaatgtcagggatgttgcctatgtcagt 741
Query: 544 ttcttttcctgatgttcctatatttaaatgttatatagttgtttacagagttgtaaaggg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ttcttttcctgatgttcctatatttaaatgttatatagttgtttacagagttgtaaaggg 801
Query: 604 tgccttggaaatggaagaagagacacttgttccgagtccaaatgaaggtgtgatttgtag 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tgccttggaaatggaagaagagacacttgttccgagtccaaatgaaggtgtgatttgtag 861
Query: 664 gactgcttttnca-gtttttgcatgtttacag 694
|||||||||| || ||||||||||||||||||
Sbjct: 862 gactgctttt-caagtttttgcatgtttacag 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1092
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1082
Effective search space: 740088
Effective search space used: 740088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_c02.g1 MSMg01no483_c02.g1 CHROMAT_FILE:
MSMg01no483_c02.g1 PHD_FILE: MSMg01no483_c02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:13 2005
(157 letters)
>mm_chr8_17860408_17860964
Length = 557
Score = 296 bits (153), Expect = 4e-85
Identities = 156/157 (99%)
Strand = Plus / Minus
Query: 1 catcacaagttcaggttgaccagttacctattgtgtcttctgaacttctgctaccctcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 catcacaagttcaggttgaccagttacctattgtgtcttctgaacttctgctaccctcaa 298
Query: 61 agactttttccacaacacctgtagattctttatgctaatgaccttaagtctcaggtgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 agactttttccacaacacctgtagattctttatgctaatgaccttaagtctcaggtgcca 238
Query: 121 taagtggctctgtctggtctcttcagaggggacttat 157
|||||||||||||||||||||||||||||||| ||||
Sbjct: 237 taagtggctctgtctggtctcttcagaggggatttat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 557
Length adjustment: 8
Effective length of query: 149
Effective length of database: 549
Effective search space: 81801
Effective search space used: 81801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
