NNNNATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCACCTGATTCCTACTGAATGGCTGAAAAGCACCTGAAAAA
ATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGA
GATTCCACCTCACACCAGTCAGAATGGCTAAAATCAAAAATTCAGGTGAC
AGCAGATGCTGGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTG
GTGGGACTGCAAGCTTGAACAACCACTCTGGAAATCAGTCTGGCGGTTCC
TCAGAAAATTGGACATAATACTATGGGAGGATCCCGCAATACCTCTCCTG
GGCATATATTCAGAAGATGTTCCAACCAGTAAGAAGGACACATGCTCCAC
TATGTTCATAGCAGCCTTATTTATTATAGCCAGAAGCTGGAAAGAACCCA
GATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACA
ATGGAGTACTGCTCAGCTATTCAAAAGAATGAATTTATGAAATCCCTAGG
CAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCAT
AAAAGAACTCTCACAATATGTACTTACTGATAAGTAGATATTAGCCCAGA
GACTTAGAATACCCAAGATATAAGATACAATTTGCTAAACGCATGAAACT
CAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTG
GGAACAAAC

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTTAACAGCACATAACTTTGCTACACTT
TGTCCTCTGCACAATTCCTGTGCAGTTCCTTTTTGCTCAGTGAGCATTGT
TGGTGATTTGGTTTTGTTTTGTTTGGAGCAACAGGATGGGTTTTTCTTTT
CTTGTTGCCTGCCCCACCCCCACCCCATCCCATCTCTCTCTCTTTTGGGA
TAAATGAATGCAGTAACAATTGCCCTGAAAACACACTAATCACAGTGCTT
CCCGTTCTATTCTTTTAAAATGTTTTGTTGAGCACTATTTGCACCTGCTA
TTCAAGTCAACAAGGAAAATCTATTCATTCAGTACTGTCCTAAAAAAAGA
TTTAGAAGTGTTTTGATTGCACACAGTGGCATGAAGAAACAGGAGAGAAG
ACATTCTTATGCCAGTTCTCATGTCTTTCTACAAGGAAGACTGTCTCTAC
AGCGGTTATTAATCTCCTACATTCCAGTGTTCAGAGGGAAAAAATACAGG
AATCTTAGCAAGTCATATCAAAGGAGGTATTTTCAAATAAGTGGCCAGTA
CTATTTTTAAAAATTTTTTATTAGGCATTTTCCTCATTTACATTTCCAAT
GCTATCCCAAAAGTCCCCCATACCTACCCCCCACTCCCCCTTTTTGGCTC
TGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCCAGTCCAATGGGCAT
CTCTTTGCAGTGATGGGCGACTAGGCCATCTTTTGN

Query= MSMg01no486_f21.g1 MSMg01no486_f21.g1 CHROMAT_FILE:
MSMg01no486_f21.g1 PHD_FILE: MSMg01no486_f21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:39 2005
         (625 letters)



>mm_chr8_29789816_29790839
          Length = 1024

 Score = 1185 bits (613), Expect = 0.0
 Identities = 622/625 (99%), Gaps = 1/625 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttaacagcacataactttgctacactttgtcctctgcacaattcctgtgcagttccttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tttaacagcacataactttgctacactttgtcctctgcacaattcctgtgcagttccttt 671

                                                                       
Query: 61  ttgctcagtgagcattgttggtgatttggttttgttttgtttggagcaacaggatgggtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ttgctcagtgagcattgttggtgatttggttttgttttgtttggagcaacaggatgggtt 611

                                                                       
Query: 121 tttcttttcttgttgcctgccccacccccaccccatcccatctctctctcttttgggata 180
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 610 tttcttttcttgttgcctgcccc-cccccaccccatcccatctctctctcttttgggata 552

                                                                       
Query: 181 aatgaatgcagtaacaattgccctgaaaacacactaatcacagtgcttcccgttctattc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aatgaatgcagtaacaattgccctgaaaacacactaatcacagtgcttcccgttctattc 492

                                                                       
Query: 241 ttttaaaatgttttgttgagcactatttgcacctgctattcaagtcaacaaggaaaatct 300
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttttaaaatgttttgatgagcactatttgcacctgctattcaagtcaacaaggaaaatct 432

                                                                       
Query: 301 attcattcagtactgtcctaaaaaaagatttagaagtgttttgattgcacacagtggcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 attcattcagtactgtcctaaaaaaagatttagaagtgttttgattgcacacagtggcat 372

                                                                       
Query: 361 gaagaaacaggagagaagacattcttatgccagttctcatgtctttctacaaggaagact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 371 gaagaaacaggagagaagacattcttatgccagttctcatgtctttctaaaaggaagact 312

                                                                       
Query: 421 gtctctacagcggttattaatctcctacattccagtgttcagagggaaaaaatacaggaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gtctctacagcggttattaatctcctacattccagtgttcagagggaaaaaatacaggaa 252

                                                                       
Query: 481 tcttagcaagtcatatcaaaggaggtattttcaaataagtggccagtactatttttaaaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tcttagcaagtcatatcaaaggaggtattttcaaataagtggccagtactatttttaaaa 192

                                                                       
Query: 541 attttttattaggcattttcctcatttacatttccaatgctatcccaaaagtcccccata 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 attttttattaggcattttcctcatttacatttccaatgctatcccaaaagtcccccata 132

                                    
Query: 601 cctaccccccactccccctttttgg 625
           |||||||||||||||||||||||||
Sbjct: 131 cctaccccccactccccctttttgg 107


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1024
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1014
Effective search space:   623610
Effective search space used:   623610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)