NNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCATCTATTATTACTGGGTTGATATTGGTTTGTGTCTTTAAT
TCCAGTAGGACACTTTTTATGAAATTCAGTGCACCAGAGTTTGGTGCATA
TATATTTAGGACTGGGATATTGTCTTGGTTAATTGTTCTTTTGATTAGAA
TGAAATGTCTCTCTTATCTCTTCTGATTAGTTTTAATTTGAAGCCTATTA
TATCAGATACTAGGAGAGCAAATTATGCTTGTTTCCTGATTCCATTTGAC
TAGAGGGGTGTGGCCCATTCTTCCTCTTTAATATAGCACCAATCTTTAAA
GTTAAGGTGGAATTTTTTTTTTTGTAGAAAAAAGGATAGATAGATTTTGG
GTTTTAACACAGTAATCTGGGCTGTTTCCTTTCATTGAAGAATTTAAACC
ATTCTTTATTAAATATTTAAATTAATATTTAAAGTTATTAGGAGGTGTGT
GTTGATTGTAGTGATTGTATTGCTGAGTCTGGGTGATATGTTTGTTCTCA
GTGGCACTTGATATTTTAATAACTATGGCTTTGTAGTTTTTTTAAAAATG
CCTCTTAGAAAGAGTGGGTGCTCTCACTCTTTTCTTCAGCCTAAAATATT
TCCTGTACATTCTTTAGGAATGGTCTGCTGAGTCNGAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTTTTTAGGCAGTTTAGGTCA

TCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGAAATCTGGTCGAGTGTGTG
ACACAAGTGTTGAGATTAAAGGCATGCAGCACTGTGCCCAGCTTCAAGGC
TATTCCATCATGAACATCCAGAAGTTTGTTTTTCTCCCTACCACCCACAG
TACTTTCTATATTTTTATTTGTTTTTATTGATCATCGATCATTCTCTACC
TTCCATGACAAATTTGTCTCTGCTTAGTAATTATTCTACCTATCTTTATA
TAATTAAATTTGCTTAAAAAAAAACAGTTTCCCACTAAATAAATGTGGAA
AGACCTGATAAAATATATAACATTAACTGTATGATTAACATGCTCTGGGT
GTTTTGAGATGTTCTTTATGTATGTAGTTTTACAAACACACATGCATGTA
CATGTGCACACATACACATATGTGTGTTCCTGTATACACCCCCACACACA
ACACACCACTATAGGTGTCCCATTCTTTAGATGAAGCAAAAATCTACACA
CGTGGACAAGTTCACACGACTGTAATCATTTGGAATCCACTCCAAGGTAT
GTTATTTCACGGCCAGTAACTTGAACTCTCAAGTTGCTATATATATAACT
ATAAATGTCTCTGTATACCAGAGGTTCATAACCTTGCAGGAAGGACTTGC
TGTCTTTTACTATTTGGGCTTCTGTAACAAATGACACTCTGGGTGA

Query= MSMg01no486_g10.g1 MSMg01no486_g10.g1 CHROMAT_FILE:
MSMg01no486_g10.g1 PHD_FILE: MSMg01no486_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:42 2005
         (595 letters)



>mm_chr8_25355439_25356433
          Length = 995

 Score = 1069 bits (553), Expect = 0.0
 Identities = 580/595 (97%), Gaps = 10/595 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   agagaaatctggtcgagtgtgtgacacaagtgttgagattaaaggcatgcagcactgtgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 619 agagaaatctggtcgagtgtgtgacacaagtgttgagattaaaggcatgcagcgctgtgc 560

                                                                       
Query: 61  ccagcttcaaggctattccatcatgaacatccagaagtttgtttttctccctaccaccca 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ccagcctcaaggctattccatcatgaacatccagaagtttgtttttctccctaccaccca 500

                                                                       
Query: 121 cagtactttctatatttttatttgtttttattgatcatcgatcattctctaccttccatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cagtactttctatatttttatttgtttttattgatcatcgatcattctctaccttccatg 440

                                                                       
Query: 181 acaaatttgtctctgcttagtaattattctacctatctttatataattaaatttgcttaa 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 439 acaaatttgtctctgcttagtaattattctacctatctttatataattaaatttgcttta 380

                                                                       
Query: 241 aaaaaaacagtttcccactaaataaatgtggaaagacctgataaaatatataacattaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaaaaaacagtttcccactaaataaatgtggaaagacctgataaaatatataacattaac 320

                                                                       
Query: 301 tgtatgattaacatgctctgggtgttttgagatgttctttatgtatgtagttttacaaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgtatgattaacatgctctgggtgttttgagatgttctttatgtatgtagttttacaaac 260

                                                                       
Query: 361 acacatgcatgtacatgtgcacacatacacatatgtgtgttcctgtatacacccccacac 420
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 259 acacatgcatgtacatgtgcacacatacacatatgtgtgttcccgtatacacccccacac 200

                                                                       
Query: 421 acaacacaccactataggtgtcccattctttagatgaagcaaaaatctacacacgtggac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 199 acaacacaccactataggtgtcccattctttagatgaagcaaaaatctacacacgtgg-- 142

                                                                       
Query: 481 aagttcacacgactgtaatcatttggaatccactccaaggtatgttatttcacggccagt 540
                   ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 141 --------acgactgtaatcatttggaatccactccaaggtatgttatttcacggtcagt 90

                                                                  
Query: 541 aacttgaactctcaagttgctatatatataactataaatgtctctgtataccaga 595
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  aacttgaactctcaagttgctatatatataactataaatgtctctgtataccaga 35


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space:   576225
Effective search space used:   576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)