TATACGACTCACTATTCAAAGAGGATCCGCGGAATTCTGTGGTCTCCGAC
TCCCTGCCACCAGCTGGTTTTAATTTTGTCCATGCTGTCCTAAGGATTAA
TACAATAATGATGTATGATGTGACTGATACACTAATGGAGTATGCTATCT
CACTGGGTGGCCTCCTTTTGGATATGCCCTTTGGTGAGACTCCAACAAAT
TTAGAATGCTTTTCTTATTGATGTACTGCCATTTATCCAGGTAATGTCAG
AGATGATAACTTCTCAAGATTTCTATTTCAAGGCAGTGGTGTAGACATAT
TATACAGCACAGACTACGCTACTCTGACAGTTCCTATGTGTGTGATATAC
CTTGTCAGTTGTTGTATCTCTATAAACAGGTCAATGTCTCACCACCTCAC
TGTTCTCAAAATACTCATGTCCAGTAAGGTAAGAATCAGCTTAAAAGTTA
CTACTGACATTGTCCCAGCCTGAGTCATTTGACTCAGCACAGTTCTGAAT
TGACATTTTTAAGTTCATACTTCACATTACATTGGATATTGTACGTTTGG
TGTCTTCACGTATAAAATGTTTGTATTTACCATACATGTTCCATAATGTG
ATACAGAATAAGCTCACTGCCCTAAAATACTTCTATTGCCTACTTCTTCA
AGCTTTCTGCCTTTCCAACAGTAGCCAATTATCTTTTTTGGAGAATTGAT
AACTA

CCTGGCGGCCGCCTGTTTCAACACATGAGGTGACACTATAGAAGTTCCAG
CAAAATTCAACTAACCTGAGATAAAGGTTCAGAACTAGATAGGGAATATT
AGTAACTGACTCCAAGTAGAGAGAGCAGTGATAATTGCCTGCTATGAGCA
GGTATTAATTAACAGAAGTCTGTGGCTCCAGGTAGAGGGAATAACAGATA
GATATTATAATAGGTATTAAATAAATGTCAGTGGCTCCTGGTAGAAAGCA
CAGCAGATAGATGGTATAAATAAATGTCTGTGGCTGGTAGAGATCACAAT
TTATATGATGGCTGCTCTTGGCAGAGAGCTTATTAATTATAAACTATCTT
ATTCCTATAGACAGATATTAGTGGAAGTTTGAATTAATTGCTTTAAAGAT
GGTATAAAGATATATTGCTCTAATAAGTCTTACAGAAACATTCTGTCTAA
CGTGGGCTCCACAGGAATTTTGGGTATAAATCCTGGTTTGATAAGCTGCT
TTTCATAAGTAGGTATGGAAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGA
AGGGAAGGGAAGNNNNNNNNNNNNNNNNNTNNNNNNTNNNNNNNTNNNNT
NNTTTTNNNNTTTTNTTTTTTNNTTTTTTTTGTTTTTTTTTTTTTTGTTT
GGTTGTGGTGNGGGNGGTGGGGTTTTGTTTTTTGTTTGNNGGTTTGTTTT
NTGTTTTGTTTGTTTTTTGN

Query= MSMg01no488_b15.b1 MSMg01no488_b15.b1 CHROMAT_FILE:
MSMg01no488_b15.b1 PHD_FILE: MSMg01no488_b15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:55 2005
         (654 letters)



>mm_chr8_105048676_105049729
          Length = 1054

 Score = 1085 bits (561), Expect = 0.0
 Identities = 634/659 (96%), Gaps = 7/659 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccctgccaccagctggttttaattttgtccatgctgtcctaaggattaatacaataatga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ccctgccaccagctggttttaattttgtccatgctgtcctaaggattaatacaataatga 600

                                                                       
Query: 61  tgtatgatgtgactgatacactaatggagtatgctatctcactgggtggcctccttttgg 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tgtattatgtgactgatacactaatggagtatgctatctcactgggtggcctccttttgg 540

                                                                       
Query: 121 ata-tgccctttggtgagactccaacaaatttagaatgcttttcttattgatgtactgcc 179
           ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 atact-ccctttggtgagactccaacaaatttagaatgcttttcttattgatgtactgcc 481

                                                                       
Query: 180 atttatccaggtaatgtcagagatgataacttctcaagatttctatttcaaggcagtggt 239
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atttattcaggtaatgtcagagatgataacttctcaagatttctatttcaaggcagtggt 421

                                                                       
Query: 240 gtagacatattatacagcacagactacgctactctgacagttcctatgtgtgtgatatac 299
           |||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gtagacataggagacagcacagactacgctactctgacagttcctatgtgtgtgatatac 361

                                                                       
Query: 300 cttgtcagttgttgtatctctataaacaggtcaatgtctcaccacctcactgttctcaaa 359
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 360 cttgtcagttgttgtatctttataaacaggttaatgtctcaccacctcactgttctcaaa 301

                                                                       
Query: 360 atactcatgtccagtaaggtaagaatcagcttaaaagttactactgacattgtcccagcc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atactcatgtccagtaaggtaagaatcagcttaaaagttactactgacattgtcccagcc 241

                                                                       
Query: 420 tgagtcatttgactcagcacagttctgaattgacatttttaagttcatacttcacattac 479
           || ||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 240 tgtgtcatttgactcaacacagttctgaattgacatttttaaattcatacttcagattac 181

                                                                       
Query: 480 attggatattgtacgtttggtgtcttc-acgt--ataaa-atgtttgtatttaccataca 535
           |||||||||||||||||||||||| || | ||  ||||| || | ||||| ||||||| |
Sbjct: 180 attggatattgtacgtttggtgtc-tcaaagtacataaatatctatgtatctaccatata 122

                                                                       
Query: 536 tgttccataatgtgatacagaataagctcactgccctaaaatacttctattgcctacttc 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 tgttccataatgtgatacagaataagctcactgccctaaaatacttctattacctacttc 62

                                                                      
Query: 596 ttcaagctttctgcctttccaacagtagccaattatcttttttggagaattgataacta 654
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61  ttcaagctttctgcctttccaacagtagccaattatctttttcggagaattgataacta 3


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)