GACTCACTATTCCGAGAGGATCCGCGGAATTCAGTCTTACCTTAGGTAGC
TATAATAAATTACTGTAGACTGGATTGTTTAAGTTATAAGCTTTAAGCTA
CAATAGTGAAGTCTAGAGAAGTCCAAGGCCAGTTGGCAGGAGGTCTGTTA
AGCATACATTTGTATTTTGTGGTGGTTTTCTTTTCATTATTACCTTGAAC
AATGGATCACAGTGCCAAGAGTATCTCACATCTCTTATTTAAAAGATACT
CGTAAAGAGCAAGGCAGTGGTGGCACATTCCTTTAATTCCAGCACTCAGG
AAGCCGAGGCAGGTGATTTTTGTGAGTTTTAGGCTATCCTGGTCTACAGA
GTGAGTTCTAGGACAGCCAGGGCATCACAAAGAAACCCTGTCTCTAAAAG
CCTAAATAAATAGTAAGTATGTATGTATGTATGTATGTATGTATGTATGT
ATGTATGTATGNNNNNNNNNNTNNNNNTNTTTNTTTTNNNTTTTTTTTTT
CCTTTTTTTTTTTNTTTTTTTTTTTTTNCTTTTTTTTTTTTTTTTCTTTT
TTTTTTTTCCTTTTTTTTTTTCCTTTCCCCCTTTCCCCTCTCTCTTTTTT
CTCTTCCCTCCCCCTCTCTTCTATTTCCTTCCCTTCTTACTTTTTCCCTT
CTTTTCTATCGCACTTCTATTCTTCCTATACTTCCCTCTCTCTTTCTTTC
TTTTTTCTCC

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAATATATGGTAATGAGAAGATTCAA
CAGAAAGAACTTGTCAAAGCAAGAAAGCAGTTCTCACCTGGAAGGGAGAA
AGAGATGGCTTATTCTGGAGTCAAATATGATCGACTGTGCCTGAGAAAAG
ACTCAGGTTTTCCTCCAAGTGCCACTCTCCACTTAGGAGATAGTTATAGA
AGATGTTTAGTTACATAACCAAGAAAGCCATTAACCAAAGCATTTACTGA
ATAAGTGGTGGGGGCTGAGGTTTAGCAAAGCATAGCAACATTGAGGACAA
GCCTCCTGCAGACCTCAGATGTTACCCAATGACATTCTTGACTTTTGGAT
TGGTAAGAGTGAGAGGTGTGCTACGACCATATTTTAAGGTCTCACTGGTC
CTAGGGATGCTAGGCCAGATATAGTTATGTACAGTTAGTTGGTGTCTTTC
AAAGGGAATAAAAATAATCCAAGACACTTTAATTCTTGTTTATAACATCT
TAACTCACGATATCCCCCAAGTTTAGCCATTTAACTTTGCAGAATCTTCT
TTTTTTTTTTAAAAAATGTATATCACAAGTATTTTGCTTGCATGTGTGTT
TATGTTCCACATGTGTGCCTCTTGCCCTGGCAAGAAAAGGGTGTTGGATT
CCATGGGGAGTACAGTTACAGATGGTTGTGAGCTACCGCGTGGGTGCTGG
GTATCAAGCCCN

Query= MSMg01no488_d18.b1 MSMg01no488_d18.b1 CHROMAT_FILE:
MSMg01no488_d18.b1 PHD_FILE: MSMg01no488_d18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:05 2005
         (442 letters)



>mm_chr8_10025221_10026062
          Length = 842

 Score =  781 bits (404), Expect = 0.0
 Identities = 417/422 (98%), Gaps = 2/422 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcagtcttaccttaggtagctataataaattactgtagactggattgtttaagtta 66
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 207 gaattcagtcttagtttaggtagctataataaattactgtagactggattgtttaagcta 266

                                                                       
Query: 67  taagctttaagctacaatagtgaagtctagagaagtccaaggccagttggcaggaggtct 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 taagctttaagctacaatagtgaagtctagagaagtccaaggccagttggcaggaggtct 326

                                                                       
Query: 127 gttaagcatacatttgtattttgtggtggttttcttttcattattaccttgaacaatgga 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gttaagcatacatttgtattttgtggtggttttcttttcattattaccttgaacaatgga 386

                                                                       
Query: 187 tcacagtgccaagagtatctcacatctcttatttaaaagatactcgtaaagagcaaggca 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tcacagtgccaagagtatctcacatctcttatttaaaagatactcgtaaagagcaaggca 446

                                                                       
Query: 247 gtggtggcacattcctttaattccagcactcaggaagccgaggcaggtgatttttgtgag 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gtggtggcacattcctttaattccagcactcaggaagccgaggcaggtgatttttgtgag 506

                                                                       
Query: 307 ttttaggctatcctggtctacagagtgagttctaggacagccagggcatcacaaagaaac 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttttaggctatcctggtctacagagtgagttctaggacagccagggcatcacaaagaaac 566

                                                                       
Query: 367 cctgtctctaaaagcctaaataaatagtaagtatgtatgtatgtatgtatgtatgtatgt 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 567 cctgtctctaaaagcctaaataaatagtaagtatgtatgtatgtatgtatgtat--atgt 624

             
Query: 427 at 428
           ||
Sbjct: 625 at 626


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space:   360689
Effective search space used:   360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)