AGTCACTTCGGACGNNGACCGCGGAATTCTTCATTACATTATGATGCATA
ATGTTAAGCAGACATCAGCCCTGGTTAGATATCACCATAGCTTTTTTTTT
TTTAATTTTGTTTTGTTTTTCATTTTGTTTTTGTGGTGTGTGTGTATGCA
TGTGTGTGGTGTGTGTGTATGCATGTGTGTGGTATGTGTGTATGCATGTG
TGGTGTGTGTGTGTGTGTATTTTTATGTGTGTGGTTTTTGTTCCCTTTTT
TGAGTTTATCTGTTGTCAGCCCCTGCCCGCTTTTTCCTCATTTTTTTCAT
CCTCCGTTCCTCTTTTTTTTTTTTTTTTTTTTTTCTTTTTCTATTTTTAT
TTTTTTTTTTTTTATTTATTTCCTTTTTTGTTTTTCTTATGTTTTCCCCC
CACTCCTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTACTCATATTCT
ACATCTTATTTCCTCTTATTTCTTTTTCTATCTCCTCCTAACCAATATCA
CCCTTATATTCCCCGCGTCTTCTCTATTTTTATTATTATACCCTTCCTTT
TCTTATTTTTCTATTTTCTCCATATATCTTTACTTTTTTCAGTCATCTTC
TCCCTCTCTCTTTTATCTTTTTTCTTACTCATTCTTCCCATTTTTTATTG
TTTCTCTTATTTTTATCATTTCATTTATATTCTCCATTACCTCTTTCTGT
TATTTTTTCTTTCTCCTTTTTTCTTTACCTCCTTTCTTATCTCCTTCTCC
TCTTCTCCTATATTTTTGTCTTTCTCTTTC

CCTGGCGGCCGCCAGTCAAAAGAAGGGAGGNGACACTATAGATTGCACCA
AAGGATTCCTTTCTTTTCACTTTAGGTTCATGACTGAGGTACCCAGGACA
AAACCTAGGGTAAGGAAAGGAGAACACGGGCGTCCTTGTACATTTTAGCC
TCTGTATTCCTTGGTCTTCATACAGAAATGCAGAACCCAAGCAACCGAAA
AACATTCTTAGATTTGATGGAGAGTGCGGGCGCCTGCAGGTGTGGGATGT
GATGAGGGGTAAGACCTAATGAAGATAACAGGCCTAAAGCAGTAGCTCTT
CACTCCACCAGATCTAGCGCATGCCTAGTGGAGAAGAATGGGGACTTAAC
AGTGACTTTCAAAGTTTGTTTTATTTCCACAAATGCCAAGAAGAATATTT
AGTAGTTTATCGAGGACAGCATCCATAGGGAAGATATGAATATATGTTCA
CTCTGTGTGAACTCAGGCCTGTGCATGTATGTGTGCATATGTGCATGCAT
GTATCCTCCAATCCTGGAGAAGAAAGCATTCCAGTTTCCATCTGTCTCCA
GAGTCATAAAGGAAATGACATGCCTGTTCAAACAGAAAGGGTGAAGGAAG
AGAAAGGTCCAGAATCCTGCTGTAAACTCATAGGCTATAGAGGACTTGAA
ATGTCTGTGGATTTTTCTGGATGGAGCTAGAGAAAGTACC

Query= MSMg01no488_o18.g1 MSMg01no488_o18.g1 CHROMAT_FILE:
MSMg01no488_o18.g1 PHD_FILE: MSMg01no488_o18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:58 2005
         (635 letters)



>mm_chr8_17251307_17252334
          Length = 1028

 Score = 1129 bits (584), Expect = 0.0
 Identities = 618/632 (97%), Gaps = 7/632 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcctttcttttcactttaggttcatgactgaggtacccaggacaaaacctagggtaagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ttcctttcttttcactttaggttcatgactgaggtacccaggacaaaacctagggtaagg 766

                                                                       
Query: 61  aaaggagaacacgggcgtccttgtacattttagcctctgtattccttggtcttcatacag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 aaaggagaacacgggcgtccttgtacattttagcctctgtattccttggtcttcatacag 706

                                                                       
Query: 121 aaatgcagaacccaagcaaccgaaaaacattcttagatttgatggagagtgcgggcgcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aaatgcagaacccaagcaaccgaaaaacattcttagatttgatggagagtgcgggcgcct 646

                                                                       
Query: 181 gcaggtgtgggatgtgatgaggggtaagacctaatgaagataacaggcctaaagcagtag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gcaggtgtgggatgtgatgaggggtaagacctaatgaagataacaggcctaaagcagtag 586

                                                                       
Query: 241 ctcttcactccaccagatctagcgcatgcctagtggagaagaatggggacttaacagtga 300
           |||||||||||||||| ||||||||||||||||||||||||||||||||  |    ||||
Sbjct: 585 ctcttcactccaccaggtctagcgcatgcctagtggagaagaatgggga--t----gtga 532

                                                                       
Query: 301 ctttcaaagtttgttttatttccacaaatgccaagaagaatatttagtagtttatcgagg 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 531 ctttcaaagtttgttttatttccacaaatgccaagaagaatatttagtagtttatcaagg 472

                                                                       
Query: 361 acagcatccatagggaagatatgaatatatgttcactctgtgtgaactcaggcctgtgca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 acagcatccatagggaagatatgaatatatgttcactctgtgtgaactcaggcctgtgca 412

                                                                       
Query: 421 tgtatgtgtgcatatgtgcatgcatgtatcctccaatcctggagaagaaagcattccagt 480
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 411 tgtatgtgtgcatatgtgcatgcatgtgtcctccaatcctggagaagaaagcattccagt 352

                                                                       
Query: 481 ttccatctgtctccagagtcataaaggaaatgacatgcctgttcaaacagaaagggtgaa 540
           |||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||
Sbjct: 351 ttccatctgtctccagagtcataaaggaaaagacaagcctgttcagacagaaagggtgaa 292

                                                                       
Query: 541 ggaagagaaaggtccagaatcctgctgtaaactcataggctatagaggacttgaaatgtc 600
           |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 291 ggaagagaaa-gtccagaatcctgctgtaacctcataggctatagaggacttgaaatgtc 233

                                           
Query: 601 tgtggatttttctggatggagctagagaaagt 632
           ||||||||||||||||||||||||||||||||
Sbjct: 232 tgtggatttttctggatggagctagagaaagt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1028
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1018
Effective search space:   636250
Effective search space used:   636250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)