Query= MSMg01no489_f03.b1 MSMg01no489_f03.b1 CHROMAT_FILE:
MSMg01no489_f03.b1 PHD_FILE: MSMg01no489_f03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:30 2005
(685 letters)
>mm_chr8_65469465_65470549
Length = 1085
Score = 1294 bits (669), Expect = 0.0
Identities = 678/681 (99%)
Strand = Plus / Minus
Query: 5 gaattcaatccccacgtactatttattgagctaattagaaacacaatcatctgtgaagtc 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gaattcaatccccaagtactatttattgagctaattagaaacacaatcatctgtgaagtc 626
Query: 65 ctagctatgatagaaagtctccatatctcaacattagccaataggaggaagaggcacttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctagctatgatagaaagtctccatatctcaacattagccaataggaggaagaggcacttt 566
Query: 125 tcactatcgacagttgcttttgaacacaaagagaagtgaaagtcagccaataaaaatgag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcactatcgacagttgcttttgaacacaaagagaagtgaaagtcagccaataaaaatgag 506
Query: 185 ggaaatgtatgtatttagtgaaagtgcatgtaaataaatttgcgtacagtaagatcacca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggaaatgtatgtatttagtgaaagtgcatgtaaataaatttgcgtacagtaagatcacca 446
Query: 245 gaggtgaaataaatcaagttatttaaaatagctcaatgtctatttttaaaccaatgactt 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 445 gaggtgaaataaatcaagttatttaaaatagctcgatgtctatttttaaaccaatgactt 386
Query: 305 tttaaaggaaaaatgaactgttttacttcattccatttcctatccttctcactattgtgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttaaaggaaaaatgaactgttttacttcattccatttcctatccttctcactattgtgc 326
Query: 365 tgccaacatatttaacaagcactaaggattaagtttattacttaaaacaggttactgaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgccaacatatttaacaagcactaaggattaagtttattacttaaaacaggttactgaga 266
Query: 425 agatagtctggtctatttcagaactacatatatttatcctcaaataaagggttctttcag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agatagtctggtctatttcagaactacatatatttatcctcaaataaagggttctttcag 206
Query: 485 aagctgggtagtggtggtgcaggtctttaatcccagcacttgggaggcagaggcagccgg 544
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 aagctgggtagtggtggtgcaggcctttaatcccagcacttgggaggcagaggcagccgg 146
Query: 545 atttctgagttctaggccagcctggtttgcagagtgagttacaggaaagccagggctaca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atttctgagttctaggccagcctggtttgcagagtgagttacaggaaagccagggctaca 86
Query: 605 gagagaaacaaagtctaaaaaacaaaaataaataaataaataataaataagcaaataaat 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gagagaaacaaagtctaaaaaacaaaaataaataaataaataataaataagcaaataaat 26
Query: 665 aagcgttctttcaagcaggtt 685
|||||||||||||||||||||
Sbjct: 25 aagcgttctttcaagcaggtt 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_f03.g1 MSMg01no489_f03.g1 CHROMAT_FILE:
MSMg01no489_f03.g1 PHD_FILE: MSMg01no489_f03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:30 2005
(624 letters)
>mm_chr8_65313455_65314483
Length = 1029
Score = 1116 bits (577), Expect = 0.0
Identities = 615/631 (97%), Gaps = 7/631 (1%)
Strand = Plus / Plus
Query: 1 ttactc--ttttttttaaattttatgtctctgagtatatttgtgtgtgaatatgtgactg 58
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttactctttttttttttaattttatgtctctgagtatatttgtgtgtgaatatgtgactg 258
Query: 59 cagttgtaggtgaggccagagatagttgtagggccccttggagctagacttacagagaga 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cagttgtaggtgaggccagagatagttgtagggccccttggagctagacttacagagaga 318
Query: 119 tatgagctggccaatgtatgtgctagcaataacacctaggcagtttgtaaaatcagtaag 178
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 319 tatgagctggccaatgtatgtgctagcaataacacccaggcagtttgtaaaatcagtaag 378
Query: 179 cagtctcaatggttgcaccatctcttcaacctataaagcatatattctttatc-----gt 233
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 379 cagtctcaatggttgcaccatctcttcaacctataaagcatatattctttatcgttatgt 438
Query: 234 tttcttctactaatcggaaattcttgattagtttttcgtatttgtctttgggaaattctt 293
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 439 tttcttctactaattggaaattcttgattagtttttcgtatttgtctttgggaaattcct 498
Query: 294 tgtgttatacccttcatactttggatatgtctcactgtaacagtacatgtttaattgaga 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgtgttatacccttcatactttggatatgtctcactgtaacagtacatgtttaattgaga 558
Query: 354 tgtcttcttacttcccttcaacaaatgttatgcataaaatcataaaaagtactagggcat 413
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 559 tgtcttcttacttcccttcaacaaattttatgcataaaatcataaaaagtactagggcat 618
Query: 414 gatgatgaaagtgtgagaggaggtactaataaaaaatcaaaggaggtggggagagggaaa 473
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 619 gatgatgaaagtgtgagaggaggtactaataaaaaatcagaggaggtggggagagggaaa 678
Query: 474 ggaaaacattcatgtaactataagaaatatttttcctgtctttctttttttaattggtta 533
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 679 ggaaaacattcatgtaactataagatatatttttcctgtctttctttttttaattggtta 738
Query: 534 ttttatttatttacatttcaaatgttccccttcctagtctccactccacaaatacccccc 593
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 739 ttttatttatttacatttcaaatgtcccccttcttagtctccactccacaaatacccccc 798
Query: 594 atttcctatcccctttcatatgactctaaga 624
|||||||||||||||||||||||||||||||
Sbjct: 799 atttcctatcccctttcatatgactctaaga 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1029
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1019
Effective search space: 625666
Effective search space used: 625666
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
