Query= MSMg01no490_g24.b1 MSMg01no490_g24.b1 CHROMAT_FILE:
MSMg01no490_g24.b1 PHD_FILE: MSMg01no490_g24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:01 2005
(529 letters)
>mm_chr8_99903062_99903990
Length = 929
Score = 671 bits (347), Expect = 0.0
Identities = 377/401 (94%), Gaps = 22/401 (5%)
Strand = Plus / Plus
Query: 5 gaattccagaacatctggggctatgtagaaagatcatttcaaaacaaaacaaaacaaagc 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagaacagctggggctatgtagaaagatcatttcaaaacaaaacaaaacaaagc 264
Query: 65 aatactgtcatttataaatcagtttcctgtgagtaactaaaatccaaccatttgcataga 124
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 265 aatactgtcatttataaatcagtttcctgtgagtaaccaaaatccaaccatttgcataga 324
Query: 125 gagagcatgctgcctctgctcctaaagggaacatttaaagcaggggtaagttacaaagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagagcatgctgcctctgctcctaaagggaacatttaaagcaggggtaagttacaaagga 384
Query: 185 ccaaaataaagtacatgttccaaactgattcctttacatggtgctgctcagttaaaaata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaaaataaagtacatgttccaaactgattcctttacatggtgctgctcagttaaaaata 444
Query: 245 aaacaaaaacaagaacaaaacaaacaaacaaaaaaaccctcaaatctctgagatagagat 304
|||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 aaacaa----------------------caaaaaaaccctcaaatctctgagatagagat 482
Query: 305 ttcccatgtctaattccaaccaaaactgaaaggcttctttctttctttctttctttcttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ttcccatgtctaattccaaccaaaactgaaaggcttctttctttctttctttctttcttt 542
Query: 365 ctttctttctttctttctttctttctttctttctttctttc 405
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ctttctttctttctttctttctttctttctttctttctttc 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 100
Number of extensions: 32
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_g24.g1 MSMg01no490_g24.g1 CHROMAT_FILE:
MSMg01no490_g24.g1 PHD_FILE: MSMg01no490_g24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:02 2005
(212 letters)
>mm_chr8_100063402_100064013
Length = 612
Score = 381 bits (197), Expect = e-110
Identities = 209/213 (98%), Gaps = 2/213 (0%)
Strand = Plus / Minus
Query: 1 cacatctttgcctgatgagtttttgaatgcggaatgtttccgagaagctcctgtgataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cacatctttgcctgatgagtttttgaatgcggaatgtttccgagaagctcctgtgataga 353
Query: 61 cacttggtgggaagctattttggaagcaggtggggcataatatta-gatgtaggtaactt 119
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 352 cacttggtgggaagctattttggaagcaggtggggcataata-gaggatgtaggtaactt 294
Query: 120 gaagctatgcatttgaaggttatgactggccatatgtctctaattctttcactgatactt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gaagctatgcatttgaaggttatgactggccatatgtctctaattctttcactgatactt 234
Query: 180 ggttagagtaatgtaagtctctgtgctctgcca 212
|||||||| ||||||||||||||||||||||||
Sbjct: 233 ggttagagcaatgtaagtctctgtgctctgcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 612
Length adjustment: 9
Effective length of query: 203
Effective length of database: 603
Effective search space: 122409
Effective search space used: 122409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
