GGCGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXTATTCGAGAGGAGG
CGCGGAATTCCACAGGTTACATAGCTACAAAGGTAGACATTCTCAGATGA
GGGAAACTAAGAGAATATATCATCAGCAGACCCAGCCCAAATGTTTAAAA
TATATACATATATGATACAGTATTTCAAAAAGAAATTTGAAAAATCAGAA
AAAAGAAAAAGCATTGAGAAAAGAAAAATTACCCATAAAAATAAAAAATG
ATATTTTTGTCCTCTGAACTTGTTTCTTTCTTCTTTCTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTACTTACTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCCTTCTCCTCCTCCTCCTCCTCCTCCACCACCACCACCA
CCACCTCCACCACCTCCTCCTCCCCCCCCCTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCCTTTTTTTAATTTTTCCAAATATTATTTCTCTATCTATCAC
TGTCTTTCCTGTAACTCACTCTTTANACCATTCTGTCCTCAAACTCAAAA
ATCCTCCTGCCTCTTGTCCTCTAAATTTCGTATNTTCACCTTTAAAATAC
ACTTCCATACTATCTGATGTGTTTCTTCTTACTTACATGGAGAAATACCT
TAATTGTTTTTTGATATATATTAGCTTTTATACTCAGCGTGGCGAACGAT
GAGTTTAAGTAATTTAGAATGATCAGGGAGTCGGTTAGAAAATTATCTTA
CGCGATTTT

NNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTATGAGGAAGATTAAGAAT
TGTGAGTGATTGACTAAGGAACAATTTATATAACAGTTCAAAGGCACAAC
TGCCATAACCGTTAGAAATCATAGGTTACTGAGTGCTTGGGTACGATGTG
GTTGTCCCTCCAAGGTTAATGACTGCAGGCTTTGACCTCGGTGTACCCAT
GTTGGGATGGCAGGAGATTTAGGAGGTGATGCCTACTGAGAGGACATTAG
GCCAATAGAACACAGGCCCTTGGTTTTTTATGGGATCACAGCCTCTCTGA
CTTCCAATTTGATGTAACCACTCCTTCATACATGCACACCTGTGGTCCAT
TCACTATAAATTCCCCATGGGGGAGGGGCTGACTCAGTAGGATTGCTCAG
TCTTAGATTTTGAACCTCTGGAATAGTTAGCTAAATAGACCTCTTTGAAG
AGTAGAGATAGTCTGTCTGAACTATTTAGTTATAGTAATACAAATGCAAA
ATAATGAGATGTAAATGACAATTTCCACACCAAATATTACAGAAGACATA
GTGACAAAAAATGCAGAAATATAAATAGAATGTGCTGAGCCACTTCATTT
GACTCTGTGTTTTAGAGAAGTAGCTATGCATAGGTGTTGAAAGAATGACT
CTCAGTTTTGCTCANAAATAATTATTGTTTCAAAATCAGTAAATGGCAGA
AT

Query= MSMg01no490_i05.g1 MSMg01no490_i05.g1 CHROMAT_FILE:
MSMg01no490_i05.g1 PHD_FILE: MSMg01no490_i05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:07 2005
         (650 letters)



>mm_chr8_99787824_99788873
          Length = 1050

 Score = 1185 bits (613), Expect = 0.0
 Identities = 639/652 (98%), Gaps = 8/652 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   atgaggaagattaagaattgtgagtgattgactaaggaacaatttatataacagttcaaa 62
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 atgaggaacattaagaattgtgagtgattgactaaggaacaatttatataacagttcaaa 791

                                                                       
Query: 63  ggcacaactgccataaccgttagaaatcataggttactgagtgcttgggtacgatgtggt 122
           ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 790 ggcacaactgccataaccgttagaaattataggttactgagtgcttgggtatgatgtggt 731

                                                                       
Query: 123 tgtccctccaaggttaatgactgcaggctttgacctcggtgtacccatgttgggatggca 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tgtccctccaaggttaatgactgcaggctttgacctcggtgtacccatgttgggatggca 671

                                                                       
Query: 183 ggagatttaggaggtgatgcctactgagaggacattaggccaatagaacacaggccctt- 241
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 670 ggagatttaagaggtgatgcctactgagaggacattaggccaatagaacacaggcccttg 611

                                                                       
Query: 242 ---ggttttttatgggatcacagcctctctgacttccaatttgatgtaaccactccttca 298
              ||    |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 acggg----ttatgggatcacagcctctctgacttccaatttgatgtaaccactccttca 555

                                                                       
Query: 299 tacatgcacacctgtggtccattcactataaattccccatgggggaggggctgactcagt 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tacatgcacacctgtggtccattcactataaattccccatgggggaggggctgactcagt 495

                                                                       
Query: 359 aggattgctcagtcttagattttgaacctctggaatagttagctaaatagacctctttga 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aggattgctcagtcttagattttgaacctctggaatagttagctaaatagacctctttga 435

                                                                       
Query: 419 agagtagagatagtctgtctgaactatttagttatagtaatacaaatgcaaaataatgag 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agagtagagatagtctgtctgaactatttagttatagtaatacaaatgcaaaataatgag 375

                                                                       
Query: 479 atgtaaatgacaatttccacaccaaatattacagaagacatagtgacaaaaaatgcagaa 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 atgtaaatgacaatttccacaccaaatattacagaagacatagtgacaaaaaatgcagaa 315

                                                                       
Query: 539 atataaatagaatgtgctgagccacttcatttgactctgtgttttagagaagtagctatg 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atataaatagaatgtgctgagccacttcatttgactctgtgttttagagaagtagctatg 255

                                                               
Query: 599 cataggtgttgaaagaatgactctcagttttgctcanaaataattattgttt 650
           |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 254 cataggtgttgaaagaatgactctcagttttgctcaaaaataattattgttt 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space:   665600
Effective search space used:   665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)