XXXXXXXXXXXXXXXXXXXXXXXXTCGAGAATACCGCGGAATTCACTTTC
CCTTTCCATTTTGCAAAGGTATCACAGACACATTGAAGTCCCCGTGACAG
AAAGGTTACTTTTCCCTCTGAGCTATTTCACCAGGCTTTGATAGAAATGT
GGTGACATTGCAACTGCTGATAACATCAGGATAAGAAGAGGGTGGTGATG
GTCCCATTGTCCTTGATGTCTGGTGATGAATCTGGGCACATGATTCCTCT
TAAGTGCTTATCCCTGTTCGGTTCTGCAGGTCAGCTGAGCCTCATATACA
GGACAGAATGCATTATTATCTATCAGGACTTGAATAGGCAGACTGACAAA
AGACAAGTCACTTTCTATAAACCCCTTTCTCGGTATTGTCTAAAAATATC
TTTGAGGGAAATGTGGCTGGTGTGTTGCTGGGGTGTCTGAGCTCATTTCT
TAGTCCTGGCTGTGCTATGTGAAGAGCTCACTGTCATCACTGCCCAGAAT
GGAAAGGGGATGCTGGGATGTGTTTTAAGAGTTTAAATTAGCTTCTCTAA
TGAAGATGAAGCAGCCAGGGGAGGCCCTCTAGGTTGAGAGGAGGTGACCA
CTTACCTTTCCTTCTCTGGCCCTTCTGCCATTTCTCCAGCTGCTCTCTGC
ATGAGAGCTCTGATTTCTTACAAGATTGTTTCCATGTTAAATCGACACTA
AATCAAGAGCACAGTGAGCCCCCTACATACTTAGTCTTTTTATATGAAGA
AATT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTT
TTCCAATTCATTTAGTGGAGGGAGCAGAAACAGTTGACTAAATTCTTCCA
TCACAAATTTAAATCACACAGGGTCAACTCAGTCAGTCCTCTTGAGCAGA
GAGAAAAAATGCACGTTATGCCATTCTGGTTGTTTTGATGACATGCAAAA
GAATGTTTCCCACTTTACTCTGTTGGAAGTGAAGGCCCTAAGGGTCTCCA
TTCATTTACTGGCACTTGGATATTTATTCCAGGGTCATAGTCAAATACCA
AAGGGATACTGAAAATTATCATTGACAACAGGAACCCAATCTAATCCAAT
GTACATTATTGGTCCTAAAATGGTAAACAAATGCACAATGCTGTATGCAG
TAAAATCAATAACATAAAGCTGTATAATGCTTTAAATGCACCAGGCCCAG
GTTTAAGTACTTCACATGTGTCAGTCATTCCTAACCATGAAACACTGGAC
GAAGACAATGATTCTTCAATCACAACTGTGGCTCACAGAGAGTAAGTCAC
CTACAAAAGCTAAATAATGCAGTGATGTGATGATTCCAGTCCTGGGATCC
AGTATCAGACATGAGAATGCTATCTTTAGATTTAGTTTTGAAACTATAGT
ACTAAAATAATAGAAAAGGGTATATTCCAGCAAGGTCCCTGACAATCATA
ACTTCACTTTTGTACTGTGAATCTCCTTANGACCTTTTTCCGATTCACTT
CTCACACCCTATC

Query= MSMg01no491_c05.b1 MSMg01no491_c05.b1 CHROMAT_FILE:
MSMg01no491_c05.b1 PHD_FILE: MSMg01no491_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:57 2005
         (249 letters)



>mm_chr8_84038713_84039361
          Length = 649

 Score =  482 bits (249), Expect = e-140
 Identities = 249/249 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaggtatcacagacacattgaagtccccgtgacagaaaggttacttttccctctgagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaggtatcacagacacattgaagtccccgtgacagaaaggttacttttccctctgagct 260

                                                                       
Query: 61  atttcaccaggctttgatagaaatgtggtgacattgcaactgctgataacatcaggataa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttcaccaggctttgatagaaatgtggtgacattgcaactgctgataacatcaggataa 320

                                                                       
Query: 121 gaagagggtggtgatggtcccattgtccttgatgtctggtgatgaatctgggcacatgat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagagggtggtgatggtcccattgtccttgatgtctggtgatgaatctgggcacatgat 380

                                                                       
Query: 181 tcctcttaagtgcttatccctgttcggttctgcaggtcagctgagcctcatatacaggac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctcttaagtgcttatccctgttcggttctgcaggtcagctgagcctcatatacaggac 440

                    
Query: 241 agaatgcat 249
           |||||||||
Sbjct: 441 agaatgcat 449


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space:   153600
Effective search space used:   153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no491_c05.g1 MSMg01no491_c05.g1 CHROMAT_FILE:
MSMg01no491_c05.g1 PHD_FILE: MSMg01no491_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:57 2005
         (612 letters)



>mm_chr8_84188826_84189837
          Length = 1012

 Score = 1164 bits (602), Expect = 0.0
 Identities = 605/606 (99%)
 Strand = Plus / Minus

                                                                       
Query: 7   aattcatttagtggagggagcagaaacagttgactaaattcttccatcacaaatttaaat 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 aattcatttagtggagggagcagaaacagttgactaaattcttccatcacaaatttaaat 753

                                                                       
Query: 67  cacacagggtcaactcagtcagtcctcttgagcagagagaaaaaatgcacgttatgccat 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 cacacagggtcaactcagtcagtcctcttgagcagagagaaaaaatgcacgttatgccat 693

                                                                       
Query: 127 tctggttgttttgatgacatgcaaaagaatgtttcccactttactctgttggaagtgaag 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tctggttgttttgatgacatgcaaaagaatgtttcccactttactctgttggaagtgaag 633

                                                                       
Query: 187 gccctaagggtctccattcatttactggcacttggatatttattccagggtcatagtcaa 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gccctaagggtctccattcatttactggcacttggatatttattccagggtcatagtcaa 573

                                                                       
Query: 247 ataccaaagggatactgaaaattatcattgacaacaggaacccaatctaatccaatgtac 306
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 572 ataccaaagggatactgaaaataatcattgacaacaggaacccaatctaatccaatgtac 513

                                                                       
Query: 307 attattggtcctaaaatggtaaacaaatgcacaatgctgtatgcagtaaaatcaataaca 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 attattggtcctaaaatggtaaacaaatgcacaatgctgtatgcagtaaaatcaataaca 453

                                                                       
Query: 367 taaagctgtataatgctttaaatgcaccaggcccaggtttaagtacttcacatgtgtcag 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 taaagctgtataatgctttaaatgcaccaggcccaggtttaagtacttcacatgtgtcag 393

                                                                       
Query: 427 tcattcctaaccatgaaacactggacgaagacaatgattcttcaatcacaactgtggctc 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tcattcctaaccatgaaacactggacgaagacaatgattcttcaatcacaactgtggctc 333

                                                                       
Query: 487 acagagagtaagtcacctacaaaagctaaataatgcagtgatgtgatgattccagtcctg 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 acagagagtaagtcacctacaaaagctaaataatgcagtgatgtgatgattccagtcctg 273

                                                                       
Query: 547 ggatccagtatcagacatgagaatgctatctttagatttagttttgaaactatagtacta 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ggatccagtatcagacatgagaatgctatctttagatttagttttgaaactatagtacta 213

                 
Query: 607 aaataa 612
           ||||||
Sbjct: 212 aaataa 207


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space:   603204
Effective search space used:   603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)