Query= MSMg01no491_n09.b1 MSMg01no491_n09.b1 CHROMAT_FILE:
MSMg01no491_n09.b1 PHD_FILE: MSMg01no491_n09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:52 2005
(560 letters)
>mm_chr8_32832148_32833108
Length = 961
Score = 1058 bits (547), Expect = 0.0
Identities = 556/561 (99%), Gaps = 5/561 (0%)
Strand = Plus / Plus
Query: 1 gagggtggttgctgtatgaaattatctgccttgtgtacctgtgcatgcacacgtatgtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagggtggttgctgtatgaaattatctgccttgtgtacctgtgcatgcacacgtatgtgc 260
Query: 61 gtgttgacggtggcaagtgggatctgtttaagccacggacatatcagataccgaagttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgttgacggtggcaagtgggatctgtttaagccacggacatatcagataccgaagttgc 320
Query: 121 tttttcagtatcctactgtctgatagcaaagagctgcagaaagagacactgtctctatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttcagtatcctactgtctgatagcaaagagctgcagaaagagacactgtctctatgc 380
Query: 181 agtagtatgataggtcataaagaatccccagctgccagagtcacaaacaacactccctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtagtatgataggtcataaagaatccccagctgccagagtcacaaacaacactccctga 440
Query: 241 gacctagttat---tttggaggttttgtgtcattctattgctctccactgactacatgca 297
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacctagttatacat--ggaggttttgtgtcattctattgctctccactgactacatgca 498
Query: 298 ccagtcctttatcctggcagggtctcatgggcatagggaggaaagaccataggcctgccc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ccagtcctttatcctggcagggtctcatgggcatagggaggaaagaccataggcctgccc 558
Query: 358 caaagccatgccactatctccagctttcaggaaccttaaaagagctctttaaacaattag 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 caaagccatgccactatctccagctttcaggaaccttaaaagagctctttaaacaattag 618
Query: 418 aagagaacagtgttgtcttagttgatcttactattgctgaaacaaaacaccaaaaaccaa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aagagaacagtgttgtcttagttgatcttactattgctgaaacaaaacaccaaaaaccaa 678
Query: 478 gttgggaaggaaaggatttagttggcttattcttccaccttgtagtcaatccgtcactga 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gttgggaaggaaaggatttagttggcttattcttccaccttgtagtcaatccgtcactga 738
Query: 538 agaaagctaggacatgaactc 558
|||||||||||||||||||||
Sbjct: 739 agaaagctaggacatgaactc 759
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 961
Length adjustment: 10
Effective length of query: 550
Effective length of database: 951
Effective search space: 523050
Effective search space used: 523050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_n09.g1 MSMg01no491_n09.g1 CHROMAT_FILE:
MSMg01no491_n09.g1 PHD_FILE: MSMg01no491_n09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:52 2005
(325 letters)
>mm_chr8_33003013_33003737
Length = 725
Score = 629 bits (325), Expect = 0.0
Identities = 325/325 (100%)
Strand = Plus / Minus
Query: 1 tctccagttctgcattttcagaatgactgggagtggcgtgtcccctagtcatcagtgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tctccagttctgcattttcagaatgactgggagtggcgtgtcccctagtcatcagtgtag 466
Query: 61 ttttggtgagatcagttgtccgtattttctcacgaatgtatgaacgtatcggagactttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ttttggtgagatcagttgtccgtattttctcacgaatgtatgaacgtatcggagactttc 406
Query: 121 agatttaaattgttactgaagtgcggaagctgacacgctagacacttagcgctcaaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 agatttaaattgttactgaagtgcggaagctgacacgctagacacttagcgctcaaagca 346
Query: 181 ggcagatctctgcgaagcaatgtgagtggattaccttcactgattctgaatgagacttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ggcagatctctgcgaagcaatgtgagtggattaccttcactgattctgaatgagacttga 286
Query: 241 caaatcctgtttgtttgcactggtgagaccatgattaccgtgaacaaggacttttggcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 caaatcctgtttgtttgcactggtgagaccatgattaccgtgaacaaggacttttggcca 226
Query: 301 ttgatgggtgagatcaagcagtatc 325
|||||||||||||||||||||||||
Sbjct: 225 ttgatgggtgagatcaagcagtatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
