TGCGGCCGCTAAACGACNCACATAGGTCGNAAATCGGCGGAANNCAGCCA
TCCATTACTTAAATCACTATAATAATCATCTTTGGATTATGACAGGAACT
TGAGATCCTTTCTTCTGTACTAAAATAAGTTAAAAGTTACTTTGTTATAT
TCTGCCCTCTAGTAATACAGAAGGAAATATTGAAGTAAGGATATATACTT
TCCATCTTGAATTGGATATTCTTATCATGATTTAAATGTGATGATCTATT
TCCTTAGTGGTCCCTGATATCTTGGATAAACTTCCAAATTGTAAATGTCA
GCTAAGAAATGAATTTTTTTGAAAATGAATTTTTTTGAATAAGAGAAATA
GGCATGTGATACTTTAATTTTTTTACTTCTGATTATATTCTTTTTACTTG
AGATCCTTCCACAACTTTTTATACATTGCCAAATTAAATATATGCAGATA
TTGAGCTCTATATAAGAAGTTATAAATATACTATTATAATAACTGTAATA
ATATAATAACATTAATTGTTGATTATATAAATGCCTTATACACCTTGTGT
TTAATTGTTTATCTCAAATACCATATCATACTATATTTATCTTCCAAATG
TTTTATATTGTTTAGATTTTGTTGTATTGCTGTTGTTGTTCATTTTTTCC
TGAGACAATATCCTCAGTGTGTAGTTTTGGGTGACCTAGAAATCACTATG
TAGAACAGGCTGTACTCAGACTCACA

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCTGTTTAGCTCTGTACCCCATTTTTAATTGGG
TTATTTGCTTTGTTGGAGTCTAACTTCTTGAGTTCTTTATATATTTTGGA
GAGCCCTCTGTCAGATATAGGGTTGGTGAAGATCTTTCCCCATTCTGTAG
ACTGTTGTTTTGTCTTATTGATGGTGGGTTTTGCCTTACAGAAGCTTTTC
TGTTTCATGAGGTCACATTTATCAATTGTTAATCTTAGAGCCTGAGCCAC
TGGTGTTCTGCTTAGGAGTTTGTCTCCTGTACCAATGCATTCAAGACAAT
TCCCACTTTCTTTTCTGTTAGATTTAGTGTATCTGGTTTTATGTTGAGGT
CTGTGATCTACTTGGACTTGAGTTTTGTGCAGGGTGATAATTATGTATCT
ATTTGCATTCTTCTACATGCAGACATCCAGTTAGACTAGCACCATTTGTT
GAAGATGTTTTCTTTTTTTCCCATTGTATGGTTTTGGCATCTTTATTCGT
TTAAATATCTTCTGCTTCTTTCTACCTTCCCTGTGAGTCTGAGATTCCAA
TTCACACTCCTGTTATGCTGACCTCTGCCTTCAGCATTATTATTTTTCAC
TTCTATTCCTCTTAAACTTTATTTCTATTGTTTCTTACAAGGCTTCTGAT
TTGCCAATTATTCTTAAGCATAAGCTATT

Query= MSMg01no491_o12.b1 MSMg01no491_o12.b1 CHROMAT_FILE:
MSMg01no491_o12.b1 PHD_FILE: MSMg01no491_o12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:58 2005
         (658 letters)



>mm_chr8_102141761_102142823
          Length = 1063

 Score =  886 bits (458), Expect = 0.0
 Identities = 568/606 (93%), Gaps = 7/606 (1%)
 Strand = Plus / Minus

                                                                       
Query: 8   tcatctttggattatgacaggaacttgagatcctttcttctgtactaaaataagttaaaa 67
           ||||||||||| ||||||| |||||||||||||   ||||||||||||||||||||||||
Sbjct: 606 tcatctttggactatgacatgaacttgagatccaaacttctgtactaaaataagttaaaa 547

                                                                       
Query: 68  gttactttgttatattctgccctctagtaatacagaaggaaatattgaagtaaggatata 127
           |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||
Sbjct: 546 gttactttgttatattctgatctctagtaatacagaaggaaacattgaagtaaggatata 487

                                                                       
Query: 128 tactttccatcttgaattggatattcttatcatgatttaaat--gtgatgatctatttcc 185
           || ||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||
Sbjct: 486 taatttccatgttgaattggatattcttatcatgatttaaataggtgatgatctgtttcc 427

                                                                       
Query: 186 ttagtggtccctgatatcttggataaacttccaaattgtaaatgtcagctaagaaatgaa 245
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttagtggtctctgatatcttggataaacttccaaattgtaaatgtcagctaagaaatgaa 367

                                                                       
Query: 246 tttttttgaaaatgaatttttttgaataagagaaataggcatgtgatactttaa--tttt 303
            | |  |||||||||| |||||||||| ||||||||||||||||||||||||||  ||||
Sbjct: 366 atgtaatgaaaatgaaattttttgaatgagagaaataggcatgtgatactttaatttttt 307

                                                                       
Query: 304 tttacttctgattatattctttttacttgagatccttccacaac-tttttatacattgcc 362
           |||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| |||
Sbjct: 306 tttacttctgattatattctctatacttgagatccttccacaacttttttatacatcgcc 247

                                                                       
Query: 363 aaattaaatatatgcagatattgagctctatataagaagttataaatatactattataat 422
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| 
Sbjct: 246 aaattaaatatatgcagatattgagctgtatataagaagttataaatatactattataac 187

                                                                       
Query: 423 aactgtaataatataataacattaattgttgattatataaatgccttatacaccttgtgt 482
           |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 186 aactgtaataatataaaaacattatttgttgattatataaatgccttatacaccttgtat 127

                                                                       
Query: 483 ttaattgtttatctcaaataccatatcatactatatttatcttccaaatgttttatattg 542
           ||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 126 ttaattgtttatctcaagtaccgtatcatactatttttatcttccaaatgttttatattg 67

                                                                       
Query: 543 tttagattttgtt-gtattgctgttgttgttca-ttttttcctgagacaatatcctcagt 600
           |||||||||||||  ||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 66  tttagattttgttcttattgttgttgttgttcatttttttcctgagacaatatcctcagt 7

                 
Query: 601 gtgtag 606
           ||||||
Sbjct: 6   gtgtag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1063
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1053
Effective search space:   682344
Effective search space used:   682344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)