TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCATGTGAGGGAATATTTCTAAGGATGAAAGAATTATAGCTTAAGTGAA
TAACTTTTTGTGAATTAAATTTTTAAAAGTCTTCCTTATTACGGTGTCTA
GAAATCTTACTAACTTAAAAGTAAGACATAGAAAATATCTCTAGAGTCAC
AAACATTTAAAACAAAACCTTTCAAAGAAAGATCTGCAGATGTCAGTGGT
GGGCAAGATCAGAGGTTCAAGATCAGAGCTTCAAGAGAAAACTTTTCTCC
CCTCTGAGAGGCTTGACTGTAATTTCACAGTCTTCTCCACCACAGTGAGG
GGAAAAACTAAAACTTGAAACTGGTTTAAAAAATGATTAAAATTTGGAAA
ACGTGTCCTTCCCTTCATAAGATTTCACTTTATATTCTTCATTTAAAAAA
TCTCCAAGTGGAAGTTGAGAGGACTGTGATGCCTGAACAGCTTCTACTGG
AAGTGGGGTCTGAAACTTACATGGACTCCACTCTTGCTACAGGATTTCTA
TGAAAAACAAAACCATGAACAAGCTTTACGAATCTTCTCCAAAGACATCT
TTCAAAGCTTTTGCAAGTGGAGGAAGAGGTAGGACAGCCCATCATCAATA
TGGTCCTATGACTATGCTTAAGGCACTTATAAATCCCATCAGGTAATAAC
TAANAATTACAGAAAGCAATTTACAGATATCATGAAGGTTCTAAGTTATA
TT

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACGCAGTTGAATCCTTCTCAACAGTCT
GTTTTACGGGAACACTTCATTAACATGACCCGCAGTTCTGGTTCCGGAAT
GAGGGATCTTCCTTGCGCCGGTGATGGTTAACTCCCGTCCCGAGTTTTCT
TGTCCCGGGTTTTTTCGTCCCAGGTTCTTTCTTCCCGGATTTTCGGCACC
AACTCTTACACGCTTTCTCACGACCGGCCAGGAAGAACGCAACAAACCGG
AATCTTCTGCGGCAAAACTTTATTGCTTACATCTTTAGGAGCAAGAAGCA
AGAGCCAGAGCAAGAGAGCAAGAAAGAGCAAGAGTGCAAGCGCTTTATTG
CTTACATCTTTAGGAGCCAGAGCGCAAGAGAGCAAGAGAGAGAAATGGCG
AAACCCCGTCCCCTTTAAGGAGAATTATTCTCCGCCTAGGACGTATTACT
CCCTGATTGGCTGCAGCCCATCGGCACGGGGAAGGCAGAGCACATGGGGT
GGAAAACTACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAAC
ACAGGATGTCAGCGCCATCTTTTAACGGCGAATGTGAGGGCGGCTCCCCA
CAGGTGGCTATCAGTGACTCCTGGAAACTATACTAAAGAAGTACATGGTC
TTTAATCACTGATCCATTTCTCCAGCCCTCTTTAAATTGCTTTAATCTN

Query= MSMg01no493_f14.b1 MSMg01no493_f14.b1 CHROMAT_FILE:
MSMg01no493_f14.b1 PHD_FILE: MSMg01no493_f14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:50 2005
         (706 letters)



>mm_chr8_7986192_7987297
          Length = 1106

 Score = 1243 bits (643), Expect = 0.0
 Identities = 687/702 (97%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatgtgagggaatatttctaaggatgaaagaattatagcttaagtgaataacttt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgtgagggaatatttctaaggatgaaagaattatagcttaagtgaataacttt 264

                                                                       
Query: 65  ttgtgaattaaatttttaaaagtcttccttattacggtgtctagaaatcttactaactta 124
           |||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 265 ttgtgaattaaaattttaaaagtcttccttattacagtatctagaaatcttactaactta 324

                                                                       
Query: 125 aaagtaagacatagaaaatatctctagagtcacaaacatttaaaacaaaacctttcaaag 184
           ||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 325 aaagtgagccatagaaaatatctctagagtcacaaacatttagaacaaaacctttcaaag 384

                                                                       
Query: 185 aaagatctgcagatgtcagtggtgggcaagatcagaggttcaagatcagagcttcaagag 244
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 385 aaagatctgccgatgtcagtggtgggcaagatcagaggttcaagatcagagcttcaagaa 444

                                                                       
Query: 245 aaaacttttctcccctctgagaggcttgactgtaatttcacagtcttctccaccacagtg 304
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaaacttttctcccctccgagaggcttgactgtaatttcacagtcttctccaccacagtg 504

                                                                       
Query: 305 aggggaaaaactaaaacttgaaactggtttaaaaaatgattaaaatttggaaaacgtgtc 364
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 505 aggggaaaaactaaaacttgaaactggtttaaaaaatgattaaaatttagaaaacgtgtc 564

                                                                       
Query: 365 cttcccttcataagatttcactttatattcttcatttaaaaaatctccaagtggaagttg 424
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttcccgtcataagatttcactttatattcttcatttaaaaaatctccaagtggaagttg 624

                                                                       
Query: 425 agaggactgtgatgcctgaacagcttctactggaagtggggtctgaaacttacatggact 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 625 agaggactgtgatgcctgaacagcttctactggaagtggggtctgaaacttacatgggct 684

                                                                       
Query: 485 ccactcttgctacaggatttctatgaaaaacaaaaccatgaacaagctttacgaatcttc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccactcttgctacaggatttctatgaaaaacaaaaccatgaacaagctttacgaatcttc 744

                                                                       
Query: 545 tccaaagacatctttcaaagcttttgcaagtggaggaagaggtaggacagcccatcatca 604
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tccaaagacacctttcaaagcttttgcaagtggaggaagaggtaggacagcccatcatca 804

                                                                       
Query: 605 atatggtcctatgactatgcttaaggcacttataaatcccatcaggtaataactaanaat 664
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 805 atatggtcctatgactatgcttaaggcacttataaatcccatcaggcaataactaaaaat 864

                                                     
Query: 665 tacagaaagcaatttacagatatcatgaaggttctaagttat 706
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tacagaaagcaatttacagatatcatgaaggttctaagttat 906


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1106
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1096
Effective search space:   762816
Effective search space used:   762816
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)