GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAGTGTGTTTTCCTGGCAATGAGACAGGGCACATATATAAAGGGCTAGA
GTGTCTTTACCATAAAAACTTGGACTTGATGGCAACTGACATATCTGTCT
CAGTTTTCACGATCAGTTATGAGACTTTCAAAGCACGTGCCATAATCTCA
AATAATTTCTCTCAAATGAAACATCTCTCTGGACAAAATGATTTCTTTTG
GTGGGGGGCGGGTGTGTGTGTGTGTGTGCTGAGCAGGGAGAACTGTTCAT
CTTCCAAGTGTATCAAAGCAGATCCGAAGAAAACAGAAAGCTAACTCTAC
TTCAAGGTATCCATTTATGTGCAATACCCATTAACTAAAGCCTTCAAACT
TCTGCTATCCATTCGCCGAGAATCAATTACCCAACTTGCTGGAAGTTAAT
TAGCCGGTGGTTCTGATTCGAGTGACAGAGATTCAGGCTTAGAGAGAATG
CTGCTGGTTTGCTGGTTTGCTGCTGAGTTCTATTAGTATTGAAAATTCCT
GGGCATCCTCTCTGTTCTAGATCCTTGGGGGTGGGGGCAGATAATGTGTA
TGTGCATGTGTGTGCCTGTATGTGTGTGTATGTGGTGTGTATGTCTGTCT
GTCTGACTGTGTGTGAGTGTGTCTGTGTGAATGCGTGTCTATCTGTGTGT
GTCTGTGTGTATGGGGATATTGTGTGCCTGTGA

GACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAA
GCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCA
AAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAA
AATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACT
CCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAG
TCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCA
ATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGA
CACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCT
GGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGG
TACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTAT
GAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGG
TAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGA
TATTAGCCCAAAACCTAGGATACCCAAGATANTAGATANCATTTGCAAAA
CACATGAAACTCAAGAAGAAATGAAGACTGAGTGTGGACACTATGCN

Query= MSMg01no493_m11.b1 MSMg01no493_m11.b1 CHROMAT_FILE:
MSMg01no493_m11.b1 PHD_FILE: MSMg01no493_m11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:27 2005
         (523 letters)



>mm_chr8_8874066_8874989
          Length = 924

 Score =  746 bits (386), Expect = 0.0
 Identities = 439/458 (95%), Gaps = 5/458 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcagtgtgttttcctggcaatgagacagggcacatatataaagggctagagtgtcttta 60
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagtgtgtcttcctggcaatgagacagggcacatatataaagggctagagtgtcttta 260

                                                                       
Query: 61  ccataaaaacttggacttgatggcaactgacatatctgtctcagttttcacgatcagtta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 ccataaaaacttggacttgatggcaactgacatatctgtctcagttttcacaatcagtta 320

                                                                       
Query: 121 tgagactttcaaagcacgtgccataatctcaaataatttctctcaaatgaaacatctctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagactttcaaagcacgtgccataatctcaaataatttctctcaaatgaaacatctctc 380

                                                                       
Query: 181 tggacaaaatgatttcttttggtggggggcgg-gtgtgtgtgtgtgtgtgctgagcaggg 239
           |||||||||||||||||||||| ||||||||| | | | | | | |||||||||||||||
Sbjct: 381 tggacaaaatgatttcttttggaggggggcggagggggagggag-gtgtgctgagcaggg 439

                                                                       
Query: 240 agaactgttcatcttccaagtgtatcaaagcagatccgaagaaaacagaaagctaactct 299
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agaactattcatcttccaagtgtatcaaagcagatccgaagaaaacagaaagctaactct 499

                                                                       
Query: 300 acttcaaggtatccatttatgtgcaatacccattaactaaagccttcaaacttctgctat 359
           |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 500 acttcaaggtatccatttatgtgcaatacccattaactaaagccttcaaactactgttat 559

                                                                       
Query: 360 ccattcgccgagaatcaattacccaacttgctggaagttaattagccggtggttctgatt 419
           ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 560 ccatttgccgagaatgaattacccaacttgctggaagttaattagccggttgttctgatt 619

                                                 
Query: 420 cgagtgacagagattcaggcttag---agagaatgctg 454
           ||||||||||||||||||||||||   |||||||||||
Sbjct: 620 cgagtgacagagattcaggcttagcagagagaatgctg 657


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 924
Length adjustment: 10
Effective length of query: 513
Effective length of database: 914
Effective search space:   468882
Effective search space used:   468882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)