XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATCATT
TCTGAAGACTTGTAGAAATAGTTACTGTTGTCTTTTGTAGTTTCTGGCTG
AAAATATCTGAGGTATAAGGGAACTGACAGATCACCTGACCCAGTCCCCT
AAGCAGAGATAAAAATAACAACATTGAGGTTGAGATTGAACCCAGGATGG
AAGAGTCATGCTTTATAATTGAAAAACATCGCCCTGTTAGAGCCGCTATG
CAAAATGGTGCAGTCTGTATAAAGGGGACCATTCTGTTTCCTGAGAAATT
AATGTAAATAAAGTTGCTCTTGAACACCAACCAGGTGAAACAAAGACACA
CTCTGTCATTTTCCCTTCTTGAAAGAACATTAATCAACTCTCTGAGACCT
GACACAATGCACTTAAGACTACCTGTCTACAATAGATTTACTTGGGAGTA
TTTAAAGTCAAATAATATTAATATTTCCTAAGGATACAGCAAGTCTCATT
TTAAACTCTGTCTTGAATAAGATGTTGACCAAGAGGAAAAAATTATCTTA
AACAAATTTTGCAAATTGAATTCATCACATAGTTTCTCAAAATATACATA
AAGTTAAATCTAGTAATGACAGTAGAATGGTATTACAGGCATGTAGTACC
ATTCATCTCTCAACTTGCATTTAAATTGTTCAAAAAAACATGTAATGTGT
ATAAGTATGTTAAAATGGTAAAATGGGGTAN

AGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTTTGTTTAGCTCTCTACCCTATTTTTAAATAGGTAAT
TTGTTTCTCTGGTGTCTTACTTCTTTAGTTCTTTGTATATATTGGATATT
AATCCTCTATTGGAAGTAGGATTGATGAAGATCTTTTCCCAATCTGTTGG
TGGACTCTTTTGTCTTATTGTCAGCATCCTTTGCCTTACAGAAGCTTTGC
AATTTTATGAGGTCCCATTTGTCAATTCTTGATCTCACAGCACAAGCCAT
TGGTGTTCTGTTCAGGAAATTTCCCCTGCCCATATATTCGAGGCTCTTCC
CCACTTTCTCTTCTATATGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCC
TTGATCCACTTAGACTTGAGCTTTGTAAGAGGAGATATGAATGGATCAAT
TCCCATTCTTCTACATGCTAACCCTCAGTTGAGCCAGCACCATATGTTAA
AAATGAAGTCTTTGTTCTACTGGATGGTGTTTGCTTCTTTGTGAAAGATC
AAGTGACCACAGATGGGCGGGTCACTTGATCTTGATTCAATACTGGGTCT
TCAATTCTATTCCACTTATTGAAAAGATATTCTACCTGTCTGTCACTATA
ACAGTACCATGCAGTTTTTATCACAGTTGCTCTGTAGTACAGCTTTAGGT
CAGTGATGGTGATTCCACCAGAGGTTC

Query= MSMg01no494_i07.b1 MSMg01no494_i07.b1 CHROMAT_FILE:
MSMg01no494_i07.b1 PHD_FILE: MSMg01no494_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:22 2005
         (676 letters)



>mm_chr8_101899843_101900917
          Length = 1075

 Score = 1259 bits (651), Expect = 0.0
 Identities = 666/671 (99%), Gaps = 1/671 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agacttgtagaaatagttactgttgtcttttgtagtttctggctgaaaatatctgaggta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacttgtagaaatagttactgttgtcttttgtagtttctggctgaaaatatctgaggta 260

                                                                       
Query: 61  taagggaactgacagatcacctgacccagtcccctaagcagagataaaaataacaacatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagggaactgacagatcacctgacccagtcccctaagcagagataaaaataacaacatt 320

                                                                       
Query: 121 gaggttgagattgaacccaggatggaagagtcatgctttataattgaaaaacatcgccct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 gaggttgagattgaacccaggatggaagagtcatgctttataattgaaacacatcgccct 380

                                                                       
Query: 181 gttagagccgctatgcaaaatggtgcagtctgtataaaggggaccattctgtttcctgag 240
           ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 gttagagccactatgcaaaatggtgcagtctgtataaaggg-accattctgtttcctgag 439

                                                                       
Query: 241 aaattaatgtaaataaagttgctcttgaacaccaaccaggtgaaacaaagacacactctg 300
           |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 440 aaattaatgtaaataaagttgctcttgaacaccaaccacgcgaaacaaagacacactctg 499

                                                                       
Query: 301 tcattttcccttcttgaaagaacattaatcaactctctgagacctgacacaatgcactta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcattttcccttcttgaaagaacattaatcaactctctgagacctgacacaatgcactta 559

                                                                       
Query: 361 agactacctgtctacaatagatttacttgggagtatttaaagtcaaataatattaatatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agactacctgtctacaatagatttacttgggagtatttaaagtcaaataatattaatatt 619

                                                                       
Query: 421 tcctaaggatacagcaagtctcattttaaactctgtcttgaataagatgttgaccaagag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcctaaggatacagcaagtctcattttaaactctgtcttgaataagatgttgaccaagag 679

                                                                       
Query: 481 gaaaaaattatcttaaacaaattttgcaaattgaattcatcacatagtttctcaaaatat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaaaaaattatcttaaacaaattttgcaaattgaattcatcacatagtttctcaaaatat 739

                                                                       
Query: 541 acataaagttaaatctagtaatgacagtagaatggtattacaggcatgtagtaccattca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 acataaagttaaatctagtaatgacagtagaatggtattacaggcatgtagtaccattca 799

                                                                       
Query: 601 tctctcaacttgcatttaaattgttcaaaaaaacatgtaatgtgtataagtatgttaaaa 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tctctcaacttgcatttaaattgttcaaaaaaacatgtaatgtgtataagtatgttaaaa 859

                      
Query: 661 tggtaaaatgg 671
           |||||||||||
Sbjct: 860 tggtaaaatgg 870


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1075
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1065
Effective search space:   709290
Effective search space used:   709290
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)