TGCGGCCGGCAAACGACTCACTATTTCGAGAGGATCCGCGGAATTCAAAG
AATATCAGTATCAAGAAAGCACTAGATACAAAGGTACTTTGCATATTAAA
TACAGTGACTAGTGTAACTATACTGTGATATTAGATAACTACATTAAAGG
AAAAGAAATTGCCATTTGAAATCTAAAATTTCTTTTGAAAAGAAAAACAC
ATTAACTCTTGTTAACATAGTTTTCCTGAATATTAAATTGATAGCCTGGT
TTAAAGAAGACCCCACTTCTTAAGTGTTAGAACACTTAGACCCCATTTCT
TGTAGTCACAACAATAGTAAAAGTCTATAAAAGTACTACAGGACAAAGAG
CAGGTACGAATCTTGATAGAAAATTCTGATTTGAAATGGTACATTTATGG
TTAGTTATGGAAAGGCTAAAGTAAGTTTGAAGTATGGATTACATAGGACT
TGTATTTTATATGTGTACATTATAACTTTTATAGATTGGACGGTACAAAG
CACCCTTTCATCAGCTAAGAATATCATATGGTACTAACAAAGGAAAAAAC
TATACTGAAGAAGAGGATCGTTTTCTCATTTGTATGCTGCACAAGCTTGG
CTTCGACAAGGAAAATGTGTATGATGAATTACGACAATGCATCCGAAACT
CCCCTCAGTTTAGATTTGATTGGTTTCTCAAGTCCAGAACTGCGATGGTG
AGTGTACAAGGTTTGTGTAATGCAGCA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXAGCCCTGTGAGGGAGGTTTTTGGTAAGGTAGCATAC
TGAGCTCCATGCCTTAGTTGAGACTAGAAGTGGAAACTTAAAACTCTTTG
GAAAGTCAATTATGTTGGATGGTGTTTTGCTGGGGCAAACACGTGAAGGA
ATATTTTCCTGAAGTGAACACAGGTGAAAGGATGTTTTGCTAAAGCAAAC
ATGTGAAAGGACACATGATGAAGGATTCTTCACTAAGCACACATATGTAT
TGGTCCACCTTACAATGAATAGCTGAGCTCTATTTGTCTGGACTCCATAC
ACAGAAATGAACCAAAAACCTTCTGGTGGTGTACTGCAGTTTCTTGCCGC
TTCCATGCACTTGGGCTGATTGGCAGGGTGATGTGAGCTGAGACAGACTC
ATGTGTAGTTTTGCTAAGACAGACTCACATGCTGAGGCAAGACACATGGT
GAGGCAAAATCTGTGGAGGACACGTGATGTTTGGGGGGAGTATAAATAGG
ACTTGGCGAACTGTGAGAGGGGCTTGCTTGTAGAGCTAGGTCTGCAATGC
TTCTTGGTCTTTGCTGATCTTAAATTCACTGAAAGAGGCATAGCAAGAAA
CTTCTCCAGTCATCCCTGTTGTCCCTGGTCTCTCCTGCTGACTCATCCCT
ATTCAGCTGAGGCCTGACTGTCTCTGC

Query= MSMg01no494_m05.b1 MSMg01no494_m05.b1 CHROMAT_FILE:
MSMg01no494_m05.b1 PHD_FILE: MSMg01no494_m05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:41 2005
         (668 letters)



>mm_chr8_83228274_83229341
          Length = 1068

 Score = 1284 bits (664), Expect = 0.0
 Identities = 667/668 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcaagaaagcactagatacaaaggtactttgcatattaaatacagtgactagtgtaact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 atcaagaaagcactagatacaaaggtactttgcatattaaatacagtgactagtgtaact 809

                                                                       
Query: 61  atactgtgatattagataactacattaaaggaaaagaaattgccatttgaaatctaaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 atactgtgatattagataactacattaaaggaaaagaaattgccatttgaaatctaaaat 749

                                                                       
Query: 121 ttcttttgaaaagaaaaacacattaactcttgttaacatagttttcctgaatattaaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ttcttttgaaaagaaaaacacattaactcttgttaacatagttttcctgaatattaaatt 689

                                                                       
Query: 181 gatagcctggtttaaagaagaccccacttcttaagtgttagaacacttagaccccatttc 240
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gttagcctggtttaaagaagaccccacttcttaagtgttagaacacttagaccccatttc 629

                                                                       
Query: 241 ttgtagtcacaacaatagtaaaagtctataaaagtactacaggacaaagagcaggtacga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ttgtagtcacaacaatagtaaaagtctataaaagtactacaggacaaagagcaggtacga 569

                                                                       
Query: 301 atcttgatagaaaattctgatttgaaatggtacatttatggttagttatggaaaggctaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 atcttgatagaaaattctgatttgaaatggtacatttatggttagttatggaaaggctaa 509

                                                                       
Query: 361 agtaagtttgaagtatggattacataggacttgtattttatatgtgtacattataacttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 agtaagtttgaagtatggattacataggacttgtattttatatgtgtacattataacttt 449

                                                                       
Query: 421 tatagattggacggtacaaagcaccctttcatcagctaagaatatcatatggtactaaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tatagattggacggtacaaagcaccctttcatcagctaagaatatcatatggtactaaca 389

                                                                       
Query: 481 aaggaaaaaactatactgaagaagaggatcgttttctcatttgtatgctgcacaagcttg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaggaaaaaactatactgaagaagaggatcgttttctcatttgtatgctgcacaagcttg 329

                                                                       
Query: 541 gcttcgacaaggaaaatgtgtatgatgaattacgacaatgcatccgaaactcccctcagt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gcttcgacaaggaaaatgtgtatgatgaattacgacaatgcatccgaaactcccctcagt 269

                                                                       
Query: 601 ttagatttgattggtttctcaagtccagaactgcgatggtgagtgtacaaggtttgtgta 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttagatttgattggtttctcaagtccagaactgcgatggtgagtgtacaaggtttgtgta 209

                   
Query: 661 atgcagca 668
           ||||||||
Sbjct: 208 atgcagca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space:   696164
Effective search space used:   696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)