NNAATATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCAGTTATTTCGTATTTCACTCACTATAGAGTATAATGCAT
TAATTAAAATTGTGTAAGGATAATAGAATGCCCAAGGTAAACGTAAAACA
ACACAGAATTGCACCAAACAGCATTAAAATCACCATAGCTGAAAGGTGGC
TGCAGTATAAACTGTTAAGGCTGGAAAACAGCCATCATGTGCAATCCCAG
ATCTGCTCAGGTTCTAATCAGTCCTCTCCTATGGAGGAGTGCAACTTCCC
AGTCCGATCATTTTTTTAACTACATGAAGAGGCTTCTGAATTAATTCTTC
CTCTGCCAAATGTGCTCACGAAAACAAGTCACCAAGGACTCTGATGATAT
TTAGTAGGAAGAACCCTTTGCAGCTTCCATTTAGCTAGGGAAGAACCCAG
TAAGTTGTAAGAACCATGTCACATCCTAGAAGACTCCTTCATTGATGGAT
TTGTTTATTATCTTATCGCTCCTAGTTGTACTAATTTACATAAAAGGGGA
GATGTTACATCAATGTAGAAACAAGATGAATATAGAAATTTGAGACTTGT
AACAGAGTTGTACTTTCTGGGAATTCCAGTTCAGTAACTGTGATTTAGCT
CAAGAAAGCTGTAGTTAAACTCAAATATAATAATTGGTAAGGAGTGAAAT
TAATACCTGGATGTACATTTTAATATAGGCCTTATGA

CCCTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAAGGTGAACAAGCTGAA
GGGCCAAAGTGAGGAGGCCTCAGTCCCACTTTGGAGAGTGAAGAAAGGTA
TCCCAAGTGGAGAGAGAGGGAGGGATCTGGGAGGGAAAGTGGGTGGTGGT
GNCCCCCCNNCCCNNCNNNNNCCCCCCCCCCCCNCCCCCCCCCCCGCCCC
CCCCTTTTTTTTCCTNCCCCCNNCNNNNNNTTTTTTTCTTTCTCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCTTTTTTTTTTTNCCNCCCCNCCCCCCN
CCCNCCCCCCCCCCCCCTCTCTTTTTTTCTCCCCCCTTTCCCNTCCTTGG
CGCCTCCTCCTTTCCCTCTTTCTCTCCTCTTTTCCCTCCCCCTCCTCTTC
CTTCTCTTTTTTTTCTTTTTCTCTCCTTTTCCCCTCGTTCTGCTCCCCCC
CCCCGCCCCTTGCTCCCCCTCCGTCTCCCCGCTCTCCCCTGTCCCGCTTC
GCTCTTCTCTGCTTTCCCCTTTTCCGTTCTCCTGTCGCGTCCCGCCCCCC
CCCCCTTCTCCCCCCGCGCCCTTCGGTTTCTCCTGTCGCCCCCCCCCCCT
TTCCTCCCCTCTTTTTTCCCGCCTTCTCTTCCCTCTCTTCCCCTTTCTCC
TCCGCCCTCTCTCTGTGCCCTCCTCCTTTCTTTTTTCCCCCTTCCCCTCT
CCCCCCGCTTTTTCTTTCCATCCCCCCTCTCCTCCCTCTTTTTTTTCTCT
TCTCTGTATTCGCCTTCCCCCCCCGCCCCCG

Query= MSMg01no495_f02.b1 MSMg01no495_f02.b1 CHROMAT_FILE:
MSMg01no495_f02.b1 PHD_FILE: MSMg01no495_f02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:22 2005
         (662 letters)



>mm_chr8_31248801_31249862
          Length = 1062

 Score = 1280 bits (662), Expect = 0.0
 Identities = 662/662 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcactcactatagagtataatgcattaattaaaattgtgtaaggataatagaatgcccaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 tcactcactatagagtataatgcattaattaaaattgtgtaaggataatagaatgcccaa 803

                                                                       
Query: 61  ggtaaacgtaaaacaacacagaattgcaccaaacagcattaaaatcaccatagctgaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ggtaaacgtaaaacaacacagaattgcaccaaacagcattaaaatcaccatagctgaaag 743

                                                                       
Query: 121 gtggctgcagtataaactgttaaggctggaaaacagccatcatgtgcaatcccagatctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gtggctgcagtataaactgttaaggctggaaaacagccatcatgtgcaatcccagatctg 683

                                                                       
Query: 181 ctcaggttctaatcagtcctctcctatggaggagtgcaacttcccagtccgatcattttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctcaggttctaatcagtcctctcctatggaggagtgcaacttcccagtccgatcattttt 623

                                                                       
Query: 241 ttaactacatgaagaggcttctgaattaattcttcctctgccaaatgtgctcacgaaaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttaactacatgaagaggcttctgaattaattcttcctctgccaaatgtgctcacgaaaac 563

                                                                       
Query: 301 aagtcaccaaggactctgatgatatttagtaggaagaaccctttgcagcttccatttagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aagtcaccaaggactctgatgatatttagtaggaagaaccctttgcagcttccatttagc 503

                                                                       
Query: 361 tagggaagaacccagtaagttgtaagaaccatgtcacatcctagaagactccttcattga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tagggaagaacccagtaagttgtaagaaccatgtcacatcctagaagactccttcattga 443

                                                                       
Query: 421 tggatttgtttattatcttatcgctcctagttgtactaatttacataaaaggggagatgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tggatttgtttattatcttatcgctcctagttgtactaatttacataaaaggggagatgt 383

                                                                       
Query: 481 tacatcaatgtagaaacaagatgaatatagaaatttgagacttgtaacagagttgtactt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tacatcaatgtagaaacaagatgaatatagaaatttgagacttgtaacagagttgtactt 323

                                                                       
Query: 541 tctgggaattccagttcagtaactgtgatttagctcaagaaagctgtagttaaactcaaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tctgggaattccagttcagtaactgtgatttagctcaagaaagctgtagttaaactcaaa 263

                                                                       
Query: 601 tataataattggtaaggagtgaaattaatacctggatgtacattttaatataggccttat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tataataattggtaaggagtgaaattaatacctggatgtacattttaatataggccttat 203

             
Query: 661 ga 662
           ||
Sbjct: 202 ga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space:   685904
Effective search space used:   685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)