NNNCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCATTATATTCCAGTTCTCATCTGTATAATCTGCTAATAAAA
TGTATTTACTATAATGATCTCTATCACTCAGTAAGAAAAAAAATGTCTTC
TAAAAAGATCATAAAACTCTGTGACCCTATTAAATTATGGATAATAGACA
TTTTAATCTCAAAATCTTAAAATGAGTCCAACAAGATAAAGATGTTGATT
TAAAAGAGAGAAAGAAAAAAAAAAGACTAAATCTAAGCATTTTCAAAGAT
GCCTATGATAAATGCTGAAAATGTTTGACTCAGGTCACCAAGTTGAGTGG
GACAGCAGGAAGTCAGCCAAAAATTGCAGATATAAAAATAAAGCCAGTAG
TAGAGCAGCACACTAGGACCTACCCGCTGGTCGGTGTCAATGAGTGACAT
TTCAGAATGGCAACCCATATAAGCTGTTTTTGCCTTTCCTAGTTTGTACC
TAGAGGTAATGAACCCGCAGCTTTGGCAAGTTCTCTGTAAAAATAAAGGT
ACTTCAGTGGAAGAGAAATAATTTCTATCTAATTTATGATATTCATCTCT
TTCAGTAACTTGTTAGCTAATTTGCCAGCAATCGATAGACAATGGCAAAG
AAGAAATTTGCTTTCAAAAGCTCTCTTCATTACATCACACTGGCCTCACA
CCACAATGGTATTTAGCTTCCTTATTCAATAGTAGTTTCATGTC

NTTTTACCGATGATGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTTAAGATTACCCATGG
AAGGAGTTACAGAGACAAAGTTTGGTGCTAAGACGAAAGGATGGACCATC
CAGAGACTACCCCACCCGGGATCCATCCCATAATCAGCCATCAAATATGG
ACACTATTGCATATACCAGCAAGATTTTCCTGAAAGAACCTGGATATAGC
TGTCTTGTGTGAGGCTATGCCAGTGCCTGGCTCACAGTCATCTATTGGAT
GGAACACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAATGAGCTG
AAGGGGTCTGCAACCCTATAGGTCGAACAACAATATGAACTAACCAGTAC
CCCCAGAGCTCATGTCTCTAGCTGCATATGCAGCAGAAGATGGCCTAGTA
GGCCATCATTGGGAAGAGAGGCCTCTTGGTCTTGCAAACTTTATACGCCC
CAGTACAGGGGAATGCCAGGGCCAAGACGTGGGATTGGGTGGGTAGGGGA
GCAGGGCGGGAGGGAGGGTATAGGGGACTTTCNNGATAGTTTTTGGAATG
TTTGGAAGAAAATGTTTGATAAAAATTGGAAAAAATAGTTTTTATGTGGG
GGTTTTCATAAAAAAGGAAGGGGAATATGGCTTTTGATTGGGTCTTCAGA
AATTTCCG

Query= MSMg01no496_j01.b1 MSMg01no496_j01.b1 CHROMAT_FILE:
MSMg01no496_j01.b1 PHD_FILE: MSMg01no496_j01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:56 2005
         (694 letters)



>mm_chr8_6185068_6186154
          Length = 1087

 Score = 1201 bits (621), Expect = 0.0
 Identities = 667/687 (97%), Gaps = 9/687 (1%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcattatattccagttctcatctgtataatctgctaataaaatgtatttactataatgat 68
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tcattagattccagttctcatctgtataatctgctaataaaatgtatttactataatgat 268

                                                                       
Query: 69  ctctatcactcagtaag-aaaaaaaatgtcttctaaaaagatcataaaactctgtgaccc 127
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctctatcactcagtaagaaaaaaaaatgtcttctaaaaagatcataaaactctgtgaccc 328

                                                                       
Query: 128 tattaaattatggataatagacattttaatctcaaaatcttaaaatgagtccaacaagat 187
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cattaaattatggataatagacattttaatctcaaaatcttaaaatgagtccaacaagat 388

                                                                       
Query: 188 aaagatgttgatttaaaagagagaaagaaaaaaaaaagactaaatctaagcattttcaaa 247
           |||||||||||||||||||||||||||||||||||||        |||||||||||||||
Sbjct: 389 aaagatgttgatttaaaagagagaaagaaaaaaaaaa--------ctaagcattttcaaa 440

                                                                       
Query: 248 gatgcctatgataaatgctgaaaatgtttgactcaggtcaccaagttgagtgggacagca 307
           ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacacctatgataaatgctgaaaatgtttgactcaggtcaccaagttgagtgggacagca 500

                                                                       
Query: 308 ggaagtcagccaaaaattgcagatataaaaataaagccagtagtagagcagcacactagg 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaagtcagccaaaaattgcagatataaaaataaagccagtagtagagcagcacactagg 560

                                                                       
Query: 368 acctacccgctggtcggtgtcaatgagtgacatttcagaatggcaacccatataagctgt 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 acctacccgctggtcggtgtcaatgagtgacatttcagaatggcaacccatatgagctgt 620

                                                                       
Query: 428 ttttgcctttcctagtttgtacctagaggtaatgaacccgcagctttggcaagttctctg 487
           ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 621 ttttgcctttcctagtttgtacctagaggtaataaacccgcagcttcggcaagttctctg 680

                                                                       
Query: 488 taaaaataaaggtacttcagtggaagagaaataatttctatctaatttatgatattcatc 547
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 taaaaataaaggtacttcagtggaaaagaaataatttctatctaatttatgatattcatc 740

                                                                       
Query: 548 tctttcagtaacttgttagctaatttgccagcaatcgatagacaatggcaaagaagaaat 607
           ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 741 tctttcagtaacttgttagctaatttgccagcagtggatagacaatggcaaagaagaaat 800

                                                                       
Query: 608 ttgctttcaaaagctctcttcattacatcacactggcctcacaccacaatggtatttagc 667
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 801 ttgctttcaaaagctctcttcattacatcacactggcctcacaccacaatgatatttagc 860

                                      
Query: 668 ttccttattcaatagtagtttcatgtc 694
           |||||||||||||||||||||||||||
Sbjct: 861 ttccttattcaatagtagtttcatgtc 887


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1087
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1077
Effective search space:   736668
Effective search space used:   736668
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)