Query= MSMg01no497_a13.b1 MSMg01no497_a13.b1 CHROMAT_FILE:
MSMg01no497_a13.b1 PHD_FILE: MSMg01no497_a13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:34 2005
(686 letters)
>mm_chr8_101380836_101381921
Length = 1086
Score = 1324 bits (685), Expect = 0.0
Identities = 685/685 (100%)
Strand = Plus / Plus
Query: 1 atattgagattttccaaggacatgttttatacacaatgaaaggagttttgtaagtatacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atattgagattttccaaggacatgttttatacacaatgaaaggagttttgtaagtatacg 260
Query: 61 ttttatagttctgaggtatctctttgctctgaccatctgtatgtgatctcccaccattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttatagttctgaggtatctctttgctctgaccatctgtatgtgatctcccaccattaa 320
Query: 121 atttaagaacttcctaccccttacacattcatacatatagtttgttttacttgagaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttaagaacttcctaccccttacacattcatacatatagtttgttttacttgagaactg 380
Query: 181 aggatttagcttctattgtaaaataggaccttgcagtctctttttgaattgaatgctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggatttagcttctattgtaaaataggaccttgcagtctctttttgaattgaatgctgaa 440
Query: 241 gaaacttcagctttaattaaaatgatagtatcaccatttaaaggctaaaatacctacaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaacttcagctttaattaaaatgatagtatcaccatttaaaggctaaaatacctacaag 500
Query: 301 gacacaagtaataatggtccagttttatgtggcttagaggactggctatcacaagaatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacacaagtaataatggtccagttttatgtggcttagaggactggctatcacaagaatac 560
Query: 361 ctcttttgcgcctggcttgcttcacgaaagaggaaggctgcttttctaaagatatgaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcttttgcgcctggcttgcttcacgaaagaggaaggctgcttttctaaagatatgaatt 620
Query: 421 ctggatctgattgcttctgtgaagaacatttaaagagggttaggcacccctggctgaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggatctgattgcttctgtgaagaacatttaaagagggttaggcacccctggctgaaaa 680
Query: 481 aaaaaatcactttgtgttaaaagtttcagagtcagctgcaatttaagtctatcaactttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaaaaatcactttgtgttaaaagtttcagagtcagctgcaatttaagtctatcaactttt 740
Query: 541 cctgtgtaaacttagacctggctcctgatctatggaggaacacatattcccaagagcagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctgtgtaaacttagacctggctcctgatctatggaggaacacatattcccaagagcagc 800
Query: 601 aaaggaaggcgatcctgtggaggtcagtgttatgactattacacagaccaactatggcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaaggaaggcgatcctgtggaggtcagtgttatgactattacacagaccaactatggcaa 860
Query: 661 agtaaagagggctgagaaaacatac 685
|||||||||||||||||||||||||
Sbjct: 861 agtaaagagggctgagaaaacatac 885
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_a13.g1 MSMg01no497_a13.g1 CHROMAT_FILE:
MSMg01no497_a13.g1 PHD_FILE: MSMg01no497_a13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:34 2005
(674 letters)
>mm_chr8_101516554_101517627
Length = 1074
Score = 1044 bits (540), Expect = 0.0
Identities = 581/606 (95%), Gaps = 18/606 (2%)
Strand = Plus / Minus
Query: 69 gtgggttgtgaagatgctgtcatttctgcataaacacaggtaataatgataacaatctat 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 gtgggttgtgaagatgctgtcatttctgcataaacacaggtaataatgataacaatctat 1015
Query: 129 cttctatctcctacccagtcttctcagttttcagcttggacaatgaatgcttttagaagg 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 cttctatctcctacccagtcttctcagttttcagcttggacaatgaatgcttttagaagg 955
Query: 189 taataacaagaaagatacatacggttttctattgagcatgagacattttttaaaatatct 248
||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 954 taataacaagaaagacacatacggttttctattgagcatgagacattttttaaagtacct 895
Query: 249 ttcattaaagatctcagagaggtatacacatgtatatacatgtgcatatatacatgaaac 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 ttcattaaagatctcagagaggtatacacatgtatatacatgtgcatatatacatgaaac 835
Query: 309 aataagtaatgaaaaagtgtctatgaatttgaaagagagcagagagggctctataaaagg 368
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 834 aataagtaatgaaaaagtgtctatgaatttgaaagagaacagagagggctctataaaagg 775
Query: 369 gggtggaaaaggaaggaagaaattgtgcaattataatctcaaaaaaaaaaacaaaaacaa 428
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 gggtggaaaaggaaggaagaaattgtgcaattataatctcaaaaaaaaaaa--------- 724
Query: 429 aaaaaaacaaaacaatgaggtaaggtctgtacccttgtcctcaggatagtatacctaaga 488
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ---------aaacaatgaggtaaggtctgtacccttgtcctcaggatagtatacctaaga 673
Query: 489 acaccaaacttcactatgaatgtagacacatcctagaatttaaacagaattaaataaaat 548
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 672 acaccaaacttcactatgaatgtagacacatcctaggatttaaacagaattaaataaaat 613
Query: 549 taaaataaataaaacactgaattttcttccagtgttttaatagtctttgtaaagacttgt 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 taaaataaataaaacactgaattttcttccagtgttttaatagtctttgtaaagacttgt 553
Query: 609 agaagaataggtggaaggattgtgaacaccaaaggggacagaaactccacaggagaacta 668
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 552 agaagaataggtggaaggactgtgaacaccaaaggggacaggaactccacaggagaacta 493
Query: 669 acagag 674
||||||
Sbjct: 492 acagag 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
