NTTTTACATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCACTTGATCTCTTATAGAAGCCAAGTCTTTCATGTCA
CCACCTGCATTGTACATACTGGGACTCTGGAAGGATTTCAGAATAGCATG
GAATGGCTAAGGAGTTCACCCAACCGCATAGTATGGAAGCAGACAAACCA
GGGCTGAAACAAACAAGGAGGCGGAGTTCAGCATTCCTTACCAACCCACA
GGGTGGTATGCAGGGATAGGATCTGCCTTCCCCTTCTGTTCTCCCTTCAT
GTGCCAACTCATGCACTACCCTGTCTCCTGAACTCAGACGGCCAGATTTA
CAGACATAATCAAGGATTCCACAACTCAAAGGCTGGAAGCCTTGGGTAGC
ACCATCCTGGGAAACTGCCCTCAGCAGGAAGCCTTGATCAGGAATACTTT
TTACTTCCTTGATTGTAAATACTTTCATGGTGGCCACATTAATTTAAACT
ATGGAGATTGCTAACTTAAACTGTGGTTGAAGATCTTACAAAGTTGGTTC
CAGTGTGAAGAAGGTGCTAAAGGGCACAGTGGTGCCCTAACCTTGAGTGG
AGCTTTAAGCTCAGGGAACTGTCTGAGCCTACCCTGATCCTTCTACCTAT
TCACCAGCCATTTCTAGACTGAGGGAAAGATACCCAAAGCCCACTGTGTT
GTGCTCACACACACATATTAGTGTGATCTGTTTAAAATTTAATTTCTATG
CAAATGTGACCACTTATGGGCATAT

TTCCTGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTGGGTTAT
ATAGTGAGACCTCAGACAATCAAAAGTTTCTTTTTCACCTCTTGTGGTCA
TCTTTTATGACCTTTGCGTGTGCACACAAGCATGCACACACACACACACA
CACACACACACACACACACACACACAAATCTAGGGTCTGCCTATGTGAAA
AGCATGTGGTATTTGCCTTGGAAACGGTAAGGAGTTAGACTAGTGATGTG
GTTTATTCCGTGGTTGAGTAAGACTTCTCTCAGAAGCCATAGGTTTTAAA
TAAAAATCCCAGTTCGGTGCCAGGTATGGAATACCTCTTTGTGAGTTGTT
GGCCGCTGAGGTCCCAATGGTCCCGCCATTGGTCTTGTCTGCCCATCAGA
ACCTGGTGGTAAGACCCTACTGCTGAAGACATTGTACATGTGAGTCACAG
GCTATTAGAAATGAAGCTAGAACTGAGCTGGAAGCTTCTTTCATACTGGC
TGGCCTTGCTAGTGCTAGAAGGTGGGAGATATGCAGGCTTCTGGGGGAGA
AAAGTCACCAACAATCTCACCCACCTATGATATAACAACGACGGTCCCTC
TAATGCAGCTGTGGCAGACTGTTATTGGGGTAACCAATAAATTGTTGTTT
GTTTTCCTGCATTTGAGGCTTGTTCCATAAGAAGGAAATATGCCTGCTTC
TATAAACCTGGTCAAAGAAA

Query= MSMg01no498_a09.b1 MSMg01no498_a09.b1 CHROMAT_FILE:
MSMg01no498_a09.b1 PHD_FILE: MSMg01no498_a09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:54 2005
         (565 letters)



>mm_chr8_121298157_121299121
          Length = 965

 Score = 1048 bits (542), Expect = 0.0
 Identities = 557/562 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcacttgatctcttatagaagccaagtctttcatgtcaccacctgcattgtacat 63
           ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 204 ggaattcacttgagctcttatagaagccaagtctttcatgtcaccacctgcagtgtacat 263

                                                                       
Query: 64  actgggactctggaaggatttcagaatagcatggaatggctaaggagttcacccaaccgc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 actgggactctggaaggatttcagaatagcatggaatggctaaggagttcacccaaccgc 323

                                                                       
Query: 124 atagtatggaagcagacaaaccagggctgaaacaaacaaggaggcggagttcagcattcc 183
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 324 atagtatggaagcagacaaaccagggctgaaacaaacaaggaagcggagttcagcattcc 383

                                                                       
Query: 184 ttaccaacccacagggtggtatgcagggataggatctgccttccccttctgttctccctt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttaccaacccacagggtggtatgcagggataggatctgccttccccttctgttctccctt 443

                                                                       
Query: 244 catgtgccaactcatgcactaccctgtctcctgaactcagacggccagatttacagacat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 catgtgccaactcatgcactaccctgtctcctgaactcagacggccagatttacagacat 503

                                                                       
Query: 304 aatcaaggattccacaactcaaaggctggaagccttgggtagcaccatcctgggaaactg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aatcaaggattccacaactcaaaggctggaagccttgggtagcaccatcctgggaaactg 563

                                                                       
Query: 364 ccctcagcaggaagccttgatcaggaatactttttacttccttgattgtaaatactttca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccctcagcaggaagccttgatcaggaatactttttacttccttgattgtaaatactttca 623

                                                                       
Query: 424 tggtggccacattaatttaaactatggagattgctaacttaaactgtggttgaagatctt 483
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tggtggccacattaacttaaactatggagattgctaacttaaactgtggttgaagatctt 683

                                                                       
Query: 484 acaaagttggttccagtgtgaagaaggtgctaaagggcacagtggtgccctaaccttgag 543
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 684 acaaagttggttccagtgtgaagaaggtgctaaagagcacagtggtgccctaaccttgag 743

                                 
Query: 544 tggagctttaagctcagggaac 565
           ||||||||||||||||||||||
Sbjct: 744 tggagctttaagctcagggaac 765


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space:   530025
Effective search space used:   530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)